Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLN6Q9NWW5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CLN6Q9NWW5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLN6Q9NWW5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.05■□□□□ 0.32
CLN6Q9NWW5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 DUSP5P2-201ENST00000426873 1033 ntBASIC17.05■□□□□ 0.32
CLN6Q9NWW5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.05■□□□□ 0.32
CLN6Q9NWW5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLN6Q9NWW5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 MIPEPP3-201ENST00000412105 444 ntBASIC17.04■□□□□ 0.32
CLN6Q9NWW5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms