Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 GNAS-203ENST00000306120 1878 ntBASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 PNMA6B-201ENST00000538162 1200 ntBASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2LQ9NUG4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 AC134043.2-201ENST00000624206 2238 ntBASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 AC092368.3-202ENST00000574180 1591 ntBASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2LQ9NUG4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCM2LQ9NUG4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.43
CCM2LQ9NUG4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCM2LQ9NUG4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCM2LQ9NUG4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 BX088651.1-201ENST00000540551 451 ntBASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 AC233263.1-201ENST00000578059 224 ntBASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2LQ9NUG4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms