Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CISHQ9NSE2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CISHQ9NSE2 AC009947.2-201ENST00000444014 672 ntBASIC19.9■□□□□ 0.78
CISHQ9NSE2 KRT18P41-201ENST00000518924 1277 ntBASIC19.9■□□□□ 0.78
CISHQ9NSE2 AL138966.2-201ENST00000621997 464 ntBASIC19.9■□□□□ 0.78
CISHQ9NSE2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CISHQ9NSE2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CISHQ9NSE2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CISHQ9NSE2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CISHQ9NSE2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CISHQ9NSE2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CISHQ9NSE2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.9■□□□□ 0.78
CISHQ9NSE2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CISHQ9NSE2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CISHQ9NSE2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CISHQ9NSE2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CISHQ9NSE2 TERF1P1-201ENST00000311003 1181 ntBASIC19.89■□□□□ 0.77
CISHQ9NSE2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CISHQ9NSE2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CISHQ9NSE2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CISHQ9NSE2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CISHQ9NSE2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CISHQ9NSE2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.89■□□□□ 0.77
CISHQ9NSE2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CISHQ9NSE2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CISHQ9NSE2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.89■□□□□ 0.77
CISHQ9NSE2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.89■□□□□ 0.77
CISHQ9NSE2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.89■□□□□ 0.77
CISHQ9NSE2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CISHQ9NSE2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CISHQ9NSE2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.89■□□□□ 0.77
CISHQ9NSE2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
CISHQ9NSE2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CISHQ9NSE2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CISHQ9NSE2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CISHQ9NSE2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
CISHQ9NSE2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.88■□□□□ 0.77
CISHQ9NSE2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.88■□□□□ 0.77
CISHQ9NSE2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 AC112777.1-201ENST00000540175 1423 ntBASIC19.88■□□□□ 0.77
CISHQ9NSE2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.88■□□□□ 0.77
CISHQ9NSE2 AC005521.1-201ENST00000393351 872 ntBASIC19.88■□□□□ 0.77
CISHQ9NSE2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.88■□□□□ 0.77
CISHQ9NSE2 LIN28AP1-201ENST00000429574 405 ntBASIC19.88■□□□□ 0.77
CISHQ9NSE2 AL137013.1-201ENST00000432946 1228 ntBASIC19.88■□□□□ 0.77
CISHQ9NSE2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.88■□□□□ 0.77
CISHQ9NSE2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CISHQ9NSE2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CISHQ9NSE2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.88■□□□□ 0.77
CISHQ9NSE2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CISHQ9NSE2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CISHQ9NSE2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CISHQ9NSE2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CISHQ9NSE2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CISHQ9NSE2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CISHQ9NSE2 HOXB1-202ENST00000577092 1414 ntBASIC19.87■□□□□ 0.77
CISHQ9NSE2 AC073508.3-201ENST00000619697 1419 ntBASIC19.87■□□□□ 0.77
CISHQ9NSE2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CISHQ9NSE2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CISHQ9NSE2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CISHQ9NSE2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.87■□□□□ 0.77
CISHQ9NSE2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CISHQ9NSE2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CISHQ9NSE2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CISHQ9NSE2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CISHQ9NSE2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
CISHQ9NSE2 KRT18P23-201ENST00000435622 1283 ntBASIC19.87■□□□□ 0.77
CISHQ9NSE2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.87■□□□□ 0.77
CISHQ9NSE2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.87■□□□□ 0.77
CISHQ9NSE2 ATP5G1P1-201ENST00000448724 379 ntBASIC19.87■□□□□ 0.77
CISHQ9NSE2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.87■□□□□ 0.77
CISHQ9NSE2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.87■□□□□ 0.77
CISHQ9NSE2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.87■□□□□ 0.77
CISHQ9NSE2 AC141257.4-201ENST00000634557 245 ntBASIC19.87■□□□□ 0.77
CISHQ9NSE2 AC136944.6-201ENST00000634818 245 ntBASIC19.87■□□□□ 0.77
CISHQ9NSE2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CISHQ9NSE2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.87■□□□□ 0.77
CISHQ9NSE2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CISHQ9NSE2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CISHQ9NSE2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CISHQ9NSE2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
CISHQ9NSE2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CISHQ9NSE2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms