Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 MFAP1P1-201ENST00000442257 1255 ntBASIC17.35■□□□□ 0.37
POLE3Q9NRF9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.35■□□□□ 0.37
POLE3Q9NRF9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLE3Q9NRF9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 RCC2P3-201ENST00000418112 1537 ntBASIC17.34■□□□□ 0.37
POLE3Q9NRF9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 AC112777.1-201ENST00000540175 1423 ntBASIC17.34■□□□□ 0.37
POLE3Q9NRF9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 SLC25A1P4-201ENST00000567977 778 ntBASIC17.34■□□□□ 0.37
POLE3Q9NRF9 AL109659.2-201ENST00000606809 1674 ntBASIC17.34■□□□□ 0.37
POLE3Q9NRF9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 AC026471.5-201ENST00000615068 467 ntBASIC17.34■□□□□ 0.37
POLE3Q9NRF9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
POLE3Q9NRF9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLE3Q9NRF9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
POLE3Q9NRF9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
POLE3Q9NRF9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.33■□□□□ 0.37
POLE3Q9NRF9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
POLE3Q9NRF9 AC090164.3-201ENST00000610780 2143 ntBASIC17.33■□□□□ 0.37
POLE3Q9NRF9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.33■□□□□ 0.37
POLE3Q9NRF9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
POLE3Q9NRF9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
POLE3Q9NRF9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLE3Q9NRF9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.33■□□□□ 0.37
POLE3Q9NRF9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLE3Q9NRF9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
POLE3Q9NRF9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 AC097488.1-201ENST00000507834 756 ntBASIC17.33■□□□□ 0.36
POLE3Q9NRF9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 AP005242.2-201ENST00000580065 1175 ntBASIC17.33■□□□□ 0.36
POLE3Q9NRF9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 REXO1L10P-201ENST00000615707 1290 ntBASIC17.33■□□□□ 0.36
POLE3Q9NRF9 REXO1L12P-201ENST00000622156 912 ntBASIC17.33■□□□□ 0.36
POLE3Q9NRF9 TMEM191A-211ENST00000637163 1067 ntBASIC17.33■□□□□ 0.36
POLE3Q9NRF9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms