Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC104417.2-201ENST00000562989 1793 ntBASIC17.34■□□□□ 0.37
CHD8Q9HCK8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CHD8Q9HCK8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHD8Q9HCK8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.33■□□□□ 0.37
CHD8Q9HCK8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHD8Q9HCK8 AL356309.3-201ENST00000624132 1934 ntBASIC17.33■□□□□ 0.37
CHD8Q9HCK8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHD8Q9HCK8 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.33■□□□□ 0.37
CHD8Q9HCK8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 ELL2P1-201ENST00000413990 1906 ntBASIC17.33■□□□□ 0.36
CHD8Q9HCK8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.33■□□□□ 0.36
CHD8Q9HCK8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.32■□□□□ 0.36
CHD8Q9HCK8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 AC108751.1-201ENST00000490852 363 ntBASIC17.32■□□□□ 0.36
CHD8Q9HCK8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 AC099343.3-201ENST00000605834 2503 ntBASIC17.32■□□□□ 0.36
CHD8Q9HCK8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 MKNK2P1-201ENST00000437526 628 ntBASIC17.32■□□□□ 0.36
CHD8Q9HCK8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 RN7SL204P-201ENST00000582831 262 ntBASIC17.32■□□□□ 0.36
CHD8Q9HCK8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.32■□□□□ 0.36
CHD8Q9HCK8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD8Q9HCK8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHD8Q9HCK8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD8Q9HCK8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD8Q9HCK8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.31■□□□□ 0.36
CHD8Q9HCK8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.31■□□□□ 0.36
CHD8Q9HCK8 AL139288.1-201ENST00000623748 933 ntBASIC17.31■□□□□ 0.36
CHD8Q9HCK8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CHD8Q9HCK8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CHD8Q9HCK8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHD8Q9HCK8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHD8Q9HCK8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD8Q9HCK8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD8Q9HCK8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.31■□□□□ 0.36
CHD8Q9HCK8 AC002472.2-201ENST00000442739 958 ntBASIC17.31■□□□□ 0.36
CHD8Q9HCK8 ABCD1P5-201ENST00000445663 754 ntBASIC17.31■□□□□ 0.36
CHD8Q9HCK8 AC093214.1-201ENST00000511688 1107 ntBASIC17.31■□□□□ 0.36
CHD8Q9HCK8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.31■□□□□ 0.36
CHD8Q9HCK8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHD8Q9HCK8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 AL513190.1-201ENST00000621254 727 ntBASIC17.3■□□□□ 0.36
CHD8Q9HCK8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.3■□□□□ 0.36
CHD8Q9HCK8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms