Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.28■□□□□ 0.68
BRD9Q9H8M2 LINC01711-201ENST00000598340 967 ntBASIC19.28■□□□□ 0.68
BRD9Q9H8M2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRD9Q9H8M2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.28■□□□□ 0.68
BRD9Q9H8M2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRD9Q9H8M2 Z82202.1-201ENST00000623446 1880 ntBASIC19.28■□□□□ 0.68
BRD9Q9H8M2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
BRD9Q9H8M2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
BRD9Q9H8M2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
BRD9Q9H8M2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 DRAXINP1-201ENST00000437611 948 ntBASIC19.27■□□□□ 0.68
BRD9Q9H8M2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 TPSP2-201ENST00000561760 610 ntBASIC19.27■□□□□ 0.68
BRD9Q9H8M2 RNF126P1-202ENST00000569893 925 ntBASIC19.27■□□□□ 0.68
BRD9Q9H8M2 AL121772.3-201ENST00000610840 674 ntBASIC19.27■□□□□ 0.68
BRD9Q9H8M2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRD9Q9H8M2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
BRD9Q9H8M2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 AC091304.2-201ENST00000564639 760 ntBASIC19.26■□□□□ 0.67
BRD9Q9H8M2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 AL732292.2-201ENST00000609649 430 ntBASIC19.26■□□□□ 0.67
BRD9Q9H8M2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRD9Q9H8M2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 AL109659.2-201ENST00000606809 1674 ntBASIC19.25■□□□□ 0.67
BRD9Q9H8M2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 TSPY19P-201ENST00000418461 509 ntBASIC19.25■□□□□ 0.67
BRD9Q9H8M2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 TSPY18P-201ENST00000441642 509 ntBASIC19.25■□□□□ 0.67
BRD9Q9H8M2 EMBP1-201ENST00000458200 901 ntBASIC19.25■□□□□ 0.67
BRD9Q9H8M2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 RCC2P3-201ENST00000418112 1537 ntBASIC19.25■□□□□ 0.67
BRD9Q9H8M2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 KRT8P7-201ENST00000533003 1432 ntBASIC19.25■□□□□ 0.67
BRD9Q9H8M2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
BRD9Q9H8M2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRD9Q9H8M2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRD9Q9H8M2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRD9Q9H8M2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms