Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.49■□□□□ 0.23
MMP28Q9H239 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP28Q9H239 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
MMP28Q9H239 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP28Q9H239 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.49■□□□□ 0.23
MMP28Q9H239 AL138781.1-201ENST00000566567 1274 ntBASIC16.49■□□□□ 0.23
MMP28Q9H239 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP28Q9H239 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.49■□□□□ 0.23
MMP28Q9H239 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP28Q9H239 TMEM191A-211ENST00000637163 1067 ntBASIC16.49■□□□□ 0.23
MMP28Q9H239 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP28Q9H239 AC046158.3-201ENST00000624947 2558 ntBASIC16.49■□□□□ 0.23
MMP28Q9H239 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP28Q9H239 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP28Q9H239 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MMP28Q9H239 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MMP28Q9H239 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP28Q9H239 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MMP28Q9H239 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP28Q9H239 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP28Q9H239 KRT17P1-201ENST00000399211 1546 ntBASIC16.49■□□□□ 0.23
MMP28Q9H239 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP28Q9H239 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP28Q9H239 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MMP28Q9H239 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP28Q9H239 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP28Q9H239 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP28Q9H239 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP28Q9H239 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP28Q9H239 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP28Q9H239 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP28Q9H239 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MMP28Q9H239 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
MMP28Q9H239 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP28Q9H239 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP28Q9H239 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
MMP28Q9H239 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
MMP28Q9H239 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP28Q9H239 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
MMP28Q9H239 IRX1P1-201ENST00000438849 1838 ntBASIC16.48■□□□□ 0.23
MMP28Q9H239 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP28Q9H239 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP28Q9H239 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP28Q9H239 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
MMP28Q9H239 BX276092.2-201ENST00000417668 665 ntBASIC16.48■□□□□ 0.23
MMP28Q9H239 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.48■□□□□ 0.23
MMP28Q9H239 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP28Q9H239 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP28Q9H239 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MMP28Q9H239 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP28Q9H239 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.48■□□□□ 0.23
MMP28Q9H239 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MMP28Q9H239 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.48■□□□□ 0.23
MMP28Q9H239 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MMP28Q9H239 AL645608.8-201ENST00000606034 2086 ntBASIC16.48■□□□□ 0.23
MMP28Q9H239 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MMP28Q9H239 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP28Q9H239 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP28Q9H239 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP28Q9H239 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MMP28Q9H239 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MMP28Q9H239 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP28Q9H239 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP28Q9H239 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP28Q9H239 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.48■□□□□ 0.23
MMP28Q9H239 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP28Q9H239 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MMP28Q9H239 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP28Q9H239 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP28Q9H239 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP28Q9H239 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP28Q9H239 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP28Q9H239 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP28Q9H239 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP28Q9H239 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP28Q9H239 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP28Q9H239 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
MMP28Q9H239 TSPY20P-201ENST00000450910 630 ntBASIC16.47■□□□□ 0.23
MMP28Q9H239 KRT18P6-201ENST00000555540 1265 ntBASIC16.47■□□□□ 0.23
MMP28Q9H239 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
MMP28Q9H239 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.47■□□□□ 0.23
MMP28Q9H239 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP28Q9H239 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP28Q9H239 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP28Q9H239 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP28Q9H239 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP28Q9H239 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP28Q9H239 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP28Q9H239 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP28Q9H239 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP28Q9H239 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.46■□□□□ 0.23
MMP28Q9H239 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP28Q9H239 KRT8P17-201ENST00000453110 1448 ntBASIC16.46■□□□□ 0.23
MMP28Q9H239 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP28Q9H239 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
MMP28Q9H239 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP28Q9H239 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP28Q9H239 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP28Q9H239 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP28Q9H239 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms