Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 KATNBL1P6-202ENST00000562413 1466 ntBASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 AC006333.2-201ENST00000607957 2099 ntBASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 KRT18P23-201ENST00000435622 1283 ntBASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 HCG4P8-203ENST00000443049 980 ntBASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 AL136038.3-201ENST00000561909 1096 ntBASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 MTMR9LP-203ENST00000426597 1545 ntBASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC6.34□□□□□ -1.39
KRTAP4-3Q9BYR4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
KRTAP4-3Q9BYR4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
KRTAP4-3Q9BYR4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
KRTAP4-3Q9BYR4 AL357033.4-201ENST00000617703 1807 ntBASIC6.34□□□□□ -1.4
KRTAP4-3Q9BYR4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
KRTAP4-3Q9BYR4 KRT8P32-201ENST00000512863 1461 ntBASIC6.34□□□□□ -1.4
KRTAP4-3Q9BYR4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC6.34□□□□□ -1.4
KRTAP4-3Q9BYR4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
KRTAP4-3Q9BYR4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms