Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL25A1Q9BXS0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 KRT89P-201ENST00000620027 1478 ntBASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 FAM207CP-201ENST00000443486 507 ntBASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 AL513210.1-201ENST00000629608 234 ntBASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.85■□□□□ 0.61
COL25A1Q9BXS0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 HOXB1-202ENST00000577092 1414 ntBASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 CRYGEP-201ENST00000412192 528 ntBASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 AC004461.1-201ENST00000412461 403 ntBASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL25A1Q9BXS0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
COL25A1Q9BXS0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
COL25A1Q9BXS0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
COL25A1Q9BXS0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL25A1Q9BXS0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
COL25A1Q9BXS0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL25A1Q9BXS0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL25A1Q9BXS0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL25A1Q9BXS0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 CRB3P1-201ENST00000449338 276 ntBASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 IGHV3-71-201ENST00000523324 359 ntBASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 AC027307.3-201ENST00000594262 1100 ntBASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL25A1Q9BXS0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 KRT18P27-201ENST00000427733 1299 ntBASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 ACTG1P14-201ENST00000446382 1122 ntBASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 AC067863.1-201ENST00000494933 530 ntBASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 AC116407.2-201ENST00000613639 860 ntBASIC18.82■□□□□ 0.6
COL25A1Q9BXS0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms