Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RPAP1Q9BWH6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.69■■□□□ 1.22
RPAP1Q9BWH6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 ZNF444P1-201ENST00000559497 298 ntBASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 AC093525.10-201ENST00000625130 1569 ntBASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC22.68■■□□□ 1.22
RPAP1Q9BWH6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
RPAP1Q9BWH6 KRT8P3-201ENST00000519669 1449 ntBASIC22.67■■□□□ 1.22
RPAP1Q9BWH6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPAP1Q9BWH6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC22.67■■□□□ 1.22
RPAP1Q9BWH6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPAP1Q9BWH6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RPAP1Q9BWH6 AC093458.2-201ENST00000623150 629 ntBASIC22.67■■□□□ 1.22
RPAP1Q9BWH6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.67■■□□□ 1.22
RPAP1Q9BWH6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.67■■□□□ 1.22
RPAP1Q9BWH6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPAP1Q9BWH6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPAP1Q9BWH6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPAP1Q9BWH6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPAP1Q9BWH6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPAP1Q9BWH6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
RPAP1Q9BWH6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 HCG4P8-203ENST00000443049 980 ntBASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 GCSHP2-201ENST00000560971 527 ntBASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 TBC1D3P2-202ENST00000577902 1649 ntBASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPAP1Q9BWH6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.65■■□□□ 1.22
RPAP1Q9BWH6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
RPAP1Q9BWH6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RPAP1Q9BWH6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC22.64■■□□□ 1.22
RPAP1Q9BWH6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC22.64■■□□□ 1.22
RPAP1Q9BWH6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC22.64■■□□□ 1.22
RPAP1Q9BWH6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.64■■□□□ 1.22
RPAP1Q9BWH6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.64■■□□□ 1.22
RPAP1Q9BWH6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC22.64■■□□□ 1.22
RPAP1Q9BWH6 CR769767.2-201ENST00000622735 460 ntBASIC22.64■■□□□ 1.22
RPAP1Q9BWH6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.64■■□□□ 1.22
RPAP1Q9BWH6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
RPAP1Q9BWH6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RPAP1Q9BWH6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RPAP1Q9BWH6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPAP1Q9BWH6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.64■■□□□ 1.21
RPAP1Q9BWH6 AL031598.1-201ENST00000561511 1773 ntBASIC22.64■■□□□ 1.21
RPAP1Q9BWH6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.64■■□□□ 1.21
RPAP1Q9BWH6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RPAP1Q9BWH6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms