Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS1Q99742 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17■□□□□ 0.31
NPAS1Q99742 AC005332.8-201ENST00000622750 2735 ntBASIC17■□□□□ 0.31
NPAS1Q99742 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17■□□□□ 0.31
NPAS1Q99742 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS1Q99742 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17■□□□□ 0.31
NPAS1Q99742 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS1Q99742 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS1Q99742 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17■□□□□ 0.31
NPAS1Q99742 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS1Q99742 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17■□□□□ 0.31
NPAS1Q99742 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17■□□□□ 0.31
NPAS1Q99742 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17■□□□□ 0.31
NPAS1Q99742 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS1Q99742 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NPAS1Q99742 AC128688.1-201ENST00000487626 519 ntBASIC17■□□□□ 0.31
NPAS1Q99742 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17■□□□□ 0.31
NPAS1Q99742 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPAS1Q99742 AC036111.1-201ENST00000533973 1582 ntBASIC17■□□□□ 0.31
NPAS1Q99742 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17■□□□□ 0.31
NPAS1Q99742 AL499627.1-201ENST00000569373 2188 ntBASIC17■□□□□ 0.31
NPAS1Q99742 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17■□□□□ 0.31
NPAS1Q99742 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPAS1Q99742 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17■□□□□ 0.31
NPAS1Q99742 AC010653.2-201ENST00000623505 997 ntBASIC17■□□□□ 0.31
NPAS1Q99742 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS1Q99742 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS1Q99742 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPAS1Q99742 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS1Q99742 AC020916.1-201ENST00000587762 1774 ntBASIC17■□□□□ 0.31
NPAS1Q99742 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.99■□□□□ 0.31
NPAS1Q99742 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.99■□□□□ 0.31
NPAS1Q99742 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.99■□□□□ 0.31
NPAS1Q99742 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.99■□□□□ 0.31
NPAS1Q99742 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.99■□□□□ 0.31
NPAS1Q99742 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.99■□□□□ 0.31
NPAS1Q99742 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.99■□□□□ 0.31
NPAS1Q99742 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.99■□□□□ 0.31
NPAS1Q99742 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.99■□□□□ 0.31
NPAS1Q99742 CR769767.2-201ENST00000622735 460 ntBASIC16.99■□□□□ 0.31
NPAS1Q99742 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.99■□□□□ 0.31
NPAS1Q99742 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.99■□□□□ 0.31
NPAS1Q99742 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.99■□□□□ 0.31
NPAS1Q99742 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.99■□□□□ 0.31
NPAS1Q99742 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NPAS1Q99742 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.99■□□□□ 0.31
NPAS1Q99742 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.99■□□□□ 0.31
NPAS1Q99742 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NPAS1Q99742 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPAS1Q99742 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NPAS1Q99742 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
NPAS1Q99742 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NPAS1Q99742 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 AC005521.1-201ENST00000393351 872 ntBASIC16.98■□□□□ 0.31
NPAS1Q99742 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.98■□□□□ 0.31
NPAS1Q99742 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.98■□□□□ 0.31
NPAS1Q99742 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.98■□□□□ 0.31
NPAS1Q99742 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.98■□□□□ 0.31
NPAS1Q99742 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.98■□□□□ 0.31
NPAS1Q99742 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.98■□□□□ 0.31
NPAS1Q99742 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
NPAS1Q99742 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NPAS1Q99742 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.98■□□□□ 0.31
NPAS1Q99742 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 AL357033.4-201ENST00000617703 1807 ntBASIC16.98■□□□□ 0.31
NPAS1Q99742 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.98■□□□□ 0.31
NPAS1Q99742 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPAS1Q99742 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NPAS1Q99742 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms