Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.86■□□□□ 0.61
PHOX2BQ99453 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHOX2BQ99453 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHOX2BQ99453 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHOX2BQ99453 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHOX2BQ99453 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PHOX2BQ99453 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHOX2BQ99453 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 AC018712.1-201ENST00000455767 687 ntBASIC18.85■□□□□ 0.61
PHOX2BQ99453 MIR3687-2-201ENST00000577708 61 ntBASIC18.85■□□□□ 0.61
PHOX2BQ99453 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHOX2BQ99453 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHOX2BQ99453 MIR3687-1-201ENST00000614492 61 ntBASIC18.85■□□□□ 0.61
PHOX2BQ99453 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 AL157888.1-201ENST00000631930 593 ntBASIC18.85■□□□□ 0.61
PHOX2BQ99453 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PHOX2BQ99453 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHOX2BQ99453 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHOX2BQ99453 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.85■□□□□ 0.61
PHOX2BQ99453 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHOX2BQ99453 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.84■□□□□ 0.61
PHOX2BQ99453 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.84■□□□□ 0.61
PHOX2BQ99453 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.84■□□□□ 0.61
PHOX2BQ99453 KRT8P11-201ENST00000409686 1436 ntBASIC18.84■□□□□ 0.61
PHOX2BQ99453 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHOX2BQ99453 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHOX2BQ99453 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PHOX2BQ99453 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHOX2BQ99453 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PHOX2BQ99453 COX20P2-201ENST00000452636 358 ntBASIC18.84■□□□□ 0.61
PHOX2BQ99453 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
PHOX2BQ99453 SEC1P-202ENST00000473944 940 ntBASIC18.84■□□□□ 0.61
PHOX2BQ99453 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.84■□□□□ 0.61
PHOX2BQ99453 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.84■□□□□ 0.61
PHOX2BQ99453 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PHOX2BQ99453 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHOX2BQ99453 AC027601.4-201ENST00000611259 610 ntBASIC18.84■□□□□ 0.61
PHOX2BQ99453 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.84■□□□□ 0.61
PHOX2BQ99453 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PHOX2BQ99453 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHOX2BQ99453 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.84■□□□□ 0.61
PHOX2BQ99453 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PHOX2BQ99453 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.84■□□□□ 0.61
PHOX2BQ99453 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHOX2BQ99453 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PHOX2BQ99453 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
PHOX2BQ99453 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
PHOX2BQ99453 AC104109.2-201ENST00000602919 1418 ntBASIC18.83■□□□□ 0.61
PHOX2BQ99453 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PHOX2BQ99453 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PHOX2BQ99453 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PHOX2BQ99453 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PHOX2BQ99453 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.83■□□□□ 0.61
PHOX2BQ99453 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PHOX2BQ99453 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PHOX2BQ99453 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
PHOX2BQ99453 MED15P5-201ENST00000423150 992 ntBASIC18.83■□□□□ 0.6
PHOX2BQ99453 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.83■□□□□ 0.6
PHOX2BQ99453 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PHOX2BQ99453 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
PHOX2BQ99453 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.83■□□□□ 0.6
PHOX2BQ99453 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC18.83■□□□□ 0.6
PHOX2BQ99453 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.83■□□□□ 0.6
PHOX2BQ99453 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.83■□□□□ 0.6
PHOX2BQ99453 FAM215A-202ENST00000632077 792 ntBASIC18.83■□□□□ 0.6
PHOX2BQ99453 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHOX2BQ99453 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHOX2BQ99453 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHOX2BQ99453 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PHOX2BQ99453 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHOX2BQ99453 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHOX2BQ99453 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.83■□□□□ 0.6
PHOX2BQ99453 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHOX2BQ99453 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHOX2BQ99453 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PHOX2BQ99453 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHOX2BQ99453 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.82■□□□□ 0.6
PHOX2BQ99453 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms