Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 MIR3180-4-201ENST00000582223 153 ntBASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDK5RAP2Q96SN8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP2Q96SN8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.96■■□□□ 1.11
CDK5RAP2Q96SN8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.96■■□□□ 1.11
CDK5RAP2Q96SN8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP2Q96SN8 AC024563.2-201ENST00000603282 481 ntBASIC21.96■■□□□ 1.11
CDK5RAP2Q96SN8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP2Q96SN8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP2Q96SN8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.96■■□□□ 1.11
CDK5RAP2Q96SN8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP2Q96SN8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP2Q96SN8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.96■■□□□ 1.11
CDK5RAP2Q96SN8 AL592071.1-201ENST00000611956 408 ntBASIC21.96■■□□□ 1.11
CDK5RAP2Q96SN8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.96■■□□□ 1.11
CDK5RAP2Q96SN8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.96■■□□□ 1.11
CDK5RAP2Q96SN8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDK5RAP2Q96SN8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CDK5RAP2Q96SN8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.95■■□□□ 1.11
CDK5RAP2Q96SN8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 TOB2P1-201ENST00000469761 992 ntBASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 AP002414.4-201ENST00000589764 1148 ntBASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDK5RAP2Q96SN8 Z83836.1-201ENST00000624605 1642 ntBASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 AC091607.1-201ENST00000490318 1060 ntBASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 MIR3652-201ENST00000579335 131 ntBASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 AC092119.3-201ENST00000612618 583 ntBASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 AC233702.3-201ENST00000578656 1387 ntBASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 AC113404.2-201ENST00000507884 177 ntBASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 AC111152.3-201ENST00000569699 673 ntBASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDK5RAP2Q96SN8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK5RAP2Q96SN8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK5RAP2Q96SN8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.93■■□□□ 1.1
CDK5RAP2Q96SN8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK5RAP2Q96SN8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK5RAP2Q96SN8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDK5RAP2Q96SN8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDK5RAP2Q96SN8 IGHGP-201ENST00000390555 1178 ntBASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms