Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TWNKQ96RR1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.8■□□□□ 0.76
TWNKQ96RR1 KRT8P50-201ENST00000562022 1438 ntBASIC19.8■□□□□ 0.76
TWNKQ96RR1 HOXB1-202ENST00000577092 1414 ntBASIC19.8■□□□□ 0.76
TWNKQ96RR1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.8■□□□□ 0.76
TWNKQ96RR1 AC005082.1-201ENST00000413042 2259 ntBASIC19.8■□□□□ 0.76
TWNKQ96RR1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.8■□□□□ 0.76
TWNKQ96RR1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TWNKQ96RR1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.8■□□□□ 0.76
TWNKQ96RR1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TWNKQ96RR1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.8■□□□□ 0.76
TWNKQ96RR1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TWNKQ96RR1 SEC1P-202ENST00000473944 940 ntBASIC19.8■□□□□ 0.76
TWNKQ96RR1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.8■□□□□ 0.76
TWNKQ96RR1 AC112497.1-201ENST00000624824 639 ntBASIC19.8■□□□□ 0.76
TWNKQ96RR1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.8■□□□□ 0.76
TWNKQ96RR1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TWNKQ96RR1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.8■□□□□ 0.76
TWNKQ96RR1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.8■□□□□ 0.76
TWNKQ96RR1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
TWNKQ96RR1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.8■□□□□ 0.76
TWNKQ96RR1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TWNKQ96RR1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TWNKQ96RR1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TWNKQ96RR1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TWNKQ96RR1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.8■□□□□ 0.76
TWNKQ96RR1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TWNKQ96RR1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TWNKQ96RR1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TWNKQ96RR1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TWNKQ96RR1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TWNKQ96RR1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWNKQ96RR1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TWNKQ96RR1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWNKQ96RR1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWNKQ96RR1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.79■□□□□ 0.76
TWNKQ96RR1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TWNKQ96RR1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWNKQ96RR1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWNKQ96RR1 KRT18P41-201ENST00000518924 1277 ntBASIC19.79■□□□□ 0.76
TWNKQ96RR1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.79■□□□□ 0.76
TWNKQ96RR1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
TWNKQ96RR1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWNKQ96RR1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.79■□□□□ 0.76
TWNKQ96RR1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWNKQ96RR1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWNKQ96RR1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWNKQ96RR1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWNKQ96RR1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWNKQ96RR1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TWNKQ96RR1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TWNKQ96RR1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.78■□□□□ 0.76
TWNKQ96RR1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWNKQ96RR1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.78■□□□□ 0.76
TWNKQ96RR1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
TWNKQ96RR1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWNKQ96RR1 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.78■□□□□ 0.76
TWNKQ96RR1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.78■□□□□ 0.76
TWNKQ96RR1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TWNKQ96RR1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWNKQ96RR1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWNKQ96RR1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TWNKQ96RR1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TWNKQ96RR1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TWNKQ96RR1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TWNKQ96RR1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TWNKQ96RR1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.78■□□□□ 0.76
TWNKQ96RR1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TWNKQ96RR1 AC126763.1-201ENST00000552015 2118 ntBASIC19.78■□□□□ 0.76
TWNKQ96RR1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TWNKQ96RR1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TWNKQ96RR1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.78■□□□□ 0.76
TWNKQ96RR1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TWNKQ96RR1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TWNKQ96RR1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TWNKQ96RR1 AK4P3-201ENST00000418260 669 ntBASIC19.77■□□□□ 0.76
TWNKQ96RR1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 DUX4L26-201ENST00000489078 1255 ntBASIC19.77■□□□□ 0.76
TWNKQ96RR1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TWNKQ96RR1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.77■□□□□ 0.76
TWNKQ96RR1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TWNKQ96RR1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TWNKQ96RR1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TWNKQ96RR1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
TWNKQ96RR1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.76■□□□□ 0.75
TWNKQ96RR1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms