Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF558Q96NG5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF558Q96NG5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF558Q96NG5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.83■□□□□ 0.76
ZNF558Q96NG5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF558Q96NG5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.83■□□□□ 0.76
ZNF558Q96NG5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.83■□□□□ 0.76
ZNF558Q96NG5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.83■□□□□ 0.76
ZNF558Q96NG5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF558Q96NG5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF558Q96NG5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.83■□□□□ 0.76
ZNF558Q96NG5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.83■□□□□ 0.76
ZNF558Q96NG5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF558Q96NG5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 AP000347.1-202ENST00000435868 847 ntBASIC19.82■□□□□ 0.76
ZNF558Q96NG5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 AC124864.1-201ENST00000623408 392 ntBASIC19.82■□□□□ 0.76
ZNF558Q96NG5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.82■□□□□ 0.76
ZNF558Q96NG5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 VENTXP7-201ENST00000475503 772 ntBASIC19.81■□□□□ 0.76
ZNF558Q96NG5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
ZNF558Q96NG5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.8■□□□□ 0.76
ZNF558Q96NG5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF558Q96NG5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.79■□□□□ 0.76
ZNF558Q96NG5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.79■□□□□ 0.76
ZNF558Q96NG5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms