Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 TSPY5P-201ENST00000426936 936 ntBASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.58■□□□□ 0.89
RPGRIP1Q96KN7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPGRIP1Q96KN7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPGRIP1Q96KN7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPGRIP1Q96KN7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 AL031598.1-201ENST00000561511 1773 ntBASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 PCED1CP-201ENST00000419887 785 ntBASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 AC131212.4-201ENST00000623606 975 ntBASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 AC093525.10-201ENST00000625130 1569 ntBASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPGRIP1Q96KN7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 AC004980.1-204ENST00000429707 299 ntBASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 DUSP5P1-201ENST00000441325 1139 ntBASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 FAM207BP-201ENST00000447172 505 ntBASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 AL138966.2-201ENST00000621997 464 ntBASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 Z98044.1-201ENST00000632503 1764 ntBASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 PHGDH-210ENST00000641115 1638 ntBASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPGRIP1Q96KN7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 AC116562.4-202ENST00000641738 218 ntBASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPGRIP1Q96KN7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms