Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PDLIM5Q96HC4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 MIR4674-201ENST00000582457 87 ntBASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM5Q96HC4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 AC092338.2-201ENST00000568827 1415 ntBASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 AP000525.1-201ENST00000608286 694 ntBASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 AL390961.4-201ENST00000623958 2535 ntBASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM5Q96HC4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 CCR12P-201ENST00000446203 998 ntBASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 SNORA78-201ENST00000459373 127 ntBASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 AP003041.3-201ENST00000527151 707 ntBASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 WWOX-216ENST00000569818 525 ntBASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 MIR4497-201ENST00000583208 89 ntBASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.23■□□□□ 0.51
PDLIM5Q96HC4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms