Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF31Q96EP0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
RNF31Q96EP0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF31Q96EP0 CR769767.2-201ENST00000622735 460 ntBASIC18.01■□□□□ 0.47
RNF31Q96EP0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF31Q96EP0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
RNF31Q96EP0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
RNF31Q96EP0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF31Q96EP0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF31Q96EP0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF31Q96EP0 TREX1-205ENST00000625293 1783 ntBASIC18.01■□□□□ 0.47
RNF31Q96EP0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF31Q96EP0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF31Q96EP0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF31Q96EP0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF31Q96EP0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF31Q96EP0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF31Q96EP0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF31Q96EP0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF31Q96EP0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF31Q96EP0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF31Q96EP0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18■□□□□ 0.47
RNF31Q96EP0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RNF31Q96EP0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF31Q96EP0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF31Q96EP0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF31Q96EP0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF31Q96EP0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RNF31Q96EP0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF31Q96EP0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18■□□□□ 0.47
RNF31Q96EP0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18■□□□□ 0.47
RNF31Q96EP0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF31Q96EP0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF31Q96EP0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18■□□□□ 0.47
RNF31Q96EP0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF31Q96EP0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18■□□□□ 0.47
RNF31Q96EP0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18■□□□□ 0.47
RNF31Q96EP0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF31Q96EP0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18■□□□□ 0.47
RNF31Q96EP0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18■□□□□ 0.47
RNF31Q96EP0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18■□□□□ 0.47
RNF31Q96EP0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18■□□□□ 0.47
RNF31Q96EP0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18■□□□□ 0.47
RNF31Q96EP0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18■□□□□ 0.47
RNF31Q96EP0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18■□□□□ 0.47
RNF31Q96EP0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RNF31Q96EP0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18■□□□□ 0.47
RNF31Q96EP0 IER3-202ENST00000376377 1350 ntBASIC18■□□□□ 0.47
RNF31Q96EP0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF31Q96EP0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18■□□□□ 0.47
RNF31Q96EP0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
RNF31Q96EP0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18■□□□□ 0.47
RNF31Q96EP0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF31Q96EP0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF31Q96EP0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF31Q96EP0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF31Q96EP0 AC024243.1-201ENST00000609234 778 ntBASIC17.99■□□□□ 0.47
RNF31Q96EP0 AC091076.1-201ENST00000610741 619 ntBASIC17.99■□□□□ 0.47
RNF31Q96EP0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF31Q96EP0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RNF31Q96EP0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF31Q96EP0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF31Q96EP0 AC005332.1-201ENST00000577698 1310 ntBASIC17.98■□□□□ 0.47
RNF31Q96EP0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF31Q96EP0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF31Q96EP0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF31Q96EP0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF31Q96EP0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF31Q96EP0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF31Q96EP0 AC099343.3-201ENST00000605834 2503 ntBASIC17.98■□□□□ 0.47
RNF31Q96EP0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF31Q96EP0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RNF31Q96EP0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF31Q96EP0 KRT18P56-201ENST00000507275 550 ntBASIC17.98■□□□□ 0.47
RNF31Q96EP0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF31Q96EP0 AC083849.1-201ENST00000615227 514 ntBASIC17.98■□□□□ 0.47
RNF31Q96EP0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF31Q96EP0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF31Q96EP0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
RNF31Q96EP0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF31Q96EP0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms