Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 AL391807.1-203ENST00000604392 2365 ntBASIC20.22■□□□□ 0.83
PGBD4Q96DM1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 BX276092.5-203ENST00000456199 560 ntBASIC20.22■□□□□ 0.83
PGBD4Q96DM1 AL121672.3-201ENST00000608644 468 ntBASIC20.22■□□□□ 0.83
PGBD4Q96DM1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.22■□□□□ 0.83
PGBD4Q96DM1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.21■□□□□ 0.83
PGBD4Q96DM1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
PGBD4Q96DM1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.2■□□□□ 0.83
PGBD4Q96DM1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 MIR3180-4-201ENST00000582223 153 ntBASIC20.2■□□□□ 0.82
PGBD4Q96DM1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 AL162741.1-201ENST00000565563 1558 ntBASIC20.2■□□□□ 0.82
PGBD4Q96DM1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PGBD4Q96DM1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 MIR662-201ENST00000384847 95 ntBASIC20.19■□□□□ 0.82
PGBD4Q96DM1 TSSC2-201ENST00000450217 709 ntBASIC20.19■□□□□ 0.82
PGBD4Q96DM1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 AC068587.9-201ENST00000641814 219 ntBASIC20.19■□□□□ 0.82
PGBD4Q96DM1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 AC093525.10-201ENST00000625130 1569 ntBASIC20.19■□□□□ 0.82
PGBD4Q96DM1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.19■□□□□ 0.82
PGBD4Q96DM1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms