Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VTI1AQ96AJ9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VTI1AQ96AJ9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VTI1AQ96AJ9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VTI1AQ96AJ9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VTI1AQ96AJ9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VTI1AQ96AJ9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
VTI1AQ96AJ9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VTI1AQ96AJ9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VTI1AQ96AJ9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.07■□□□□ 0.96
VTI1AQ96AJ9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VTI1AQ96AJ9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VTI1AQ96AJ9 ZNF815P-204ENST00000434898 1737 ntBASIC21.07■□□□□ 0.96
VTI1AQ96AJ9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 AP002414.4-201ENST00000589764 1148 ntBASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.06■□□□□ 0.96
VTI1AQ96AJ9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 AL023284.2-201ENST00000405850 579 ntBASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 UNC93B7-201ENST00000509439 705 ntBASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 MIR3180-1-201ENST00000580374 94 ntBASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 MIR3180-3-201ENST00000584616 94 ntBASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
VTI1AQ96AJ9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 MCCD1P1-208ENST00000445732 328 ntBASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 KRT8P26-201ENST00000534154 1276 ntBASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 KRT18P1-202ENST00000452408 1331 ntBASIC21.04■□□□□ 0.96
VTI1AQ96AJ9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTI1AQ96AJ9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms