Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE4Q96A23 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.77■□□□□ 0.27
CPNE4Q96A23 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE4Q96A23 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE4Q96A23 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE4Q96A23 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.77■□□□□ 0.27
CPNE4Q96A23 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.77■□□□□ 0.27
CPNE4Q96A23 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.76■□□□□ 0.27
CPNE4Q96A23 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 AC008556.1-201ENST00000610908 2040 ntBASIC16.76■□□□□ 0.27
CPNE4Q96A23 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CPNE4Q96A23 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.76■□□□□ 0.27
CPNE4Q96A23 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE4Q96A23 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.76■□□□□ 0.27
CPNE4Q96A23 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CPNE4Q96A23 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE4Q96A23 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CPNE4Q96A23 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE4Q96A23 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CPNE4Q96A23 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE4Q96A23 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CPNE4Q96A23 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 AC009947.2-201ENST00000444014 672 ntBASIC16.75■□□□□ 0.27
CPNE4Q96A23 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 COX11P1-201ENST00000489116 835 ntBASIC16.75■□□□□ 0.27
CPNE4Q96A23 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CPNE4Q96A23 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE4Q96A23 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CPNE4Q96A23 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE4Q96A23 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE4Q96A23 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE4Q96A23 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE4Q96A23 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE4Q96A23 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE4Q96A23 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE4Q96A23 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CPNE4Q96A23 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE4Q96A23 KRT8P7-201ENST00000533003 1432 ntBASIC16.74■□□□□ 0.27
CPNE4Q96A23 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE4Q96A23 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE4Q96A23 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE4Q96A23 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE4Q96A23 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE4Q96A23 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms