Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC079834.2-201ENST00000609776 1949 ntBASIC16.24■□□□□ 0.19
USP9XQ93008 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
USP9XQ93008 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
USP9XQ93008 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
USP9XQ93008 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.24■□□□□ 0.19
USP9XQ93008 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
USP9XQ93008 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
USP9XQ93008 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
USP9XQ93008 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.24■□□□□ 0.19
USP9XQ93008 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
USP9XQ93008 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.24■□□□□ 0.19
USP9XQ93008 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.24■□□□□ 0.19
USP9XQ93008 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
USP9XQ93008 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
USP9XQ93008 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.23■□□□□ 0.19
USP9XQ93008 KRT89P-201ENST00000620027 1478 ntBASIC16.23■□□□□ 0.19
USP9XQ93008 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
USP9XQ93008 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
USP9XQ93008 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.23■□□□□ 0.19
USP9XQ93008 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.23■□□□□ 0.19
USP9XQ93008 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
USP9XQ93008 AC008556.1-201ENST00000610908 2040 ntBASIC16.23■□□□□ 0.19
USP9XQ93008 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
USP9XQ93008 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP9XQ93008 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.23■□□□□ 0.19
USP9XQ93008 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
USP9XQ93008 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
USP9XQ93008 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.23■□□□□ 0.19
USP9XQ93008 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP9XQ93008 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
USP9XQ93008 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.23■□□□□ 0.19
USP9XQ93008 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.23■□□□□ 0.19
USP9XQ93008 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.23■□□□□ 0.19
USP9XQ93008 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.23■□□□□ 0.19
USP9XQ93008 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.23■□□□□ 0.19
USP9XQ93008 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.23■□□□□ 0.19
USP9XQ93008 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.23■□□□□ 0.19
USP9XQ93008 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
USP9XQ93008 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.23■□□□□ 0.19
USP9XQ93008 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.23■□□□□ 0.19
USP9XQ93008 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
USP9XQ93008 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.22■□□□□ 0.19
USP9XQ93008 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.22■□□□□ 0.19
USP9XQ93008 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.22■□□□□ 0.19
USP9XQ93008 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP9XQ93008 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.22■□□□□ 0.19
USP9XQ93008 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP9XQ93008 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP9XQ93008 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.22■□□□□ 0.19
USP9XQ93008 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.22■□□□□ 0.19
USP9XQ93008 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.22■□□□□ 0.19
USP9XQ93008 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP9XQ93008 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP9XQ93008 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP9XQ93008 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP9XQ93008 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
USP9XQ93008 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
USP9XQ93008 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP9XQ93008 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.22■□□□□ 0.19
USP9XQ93008 MCCD1P2-201ENST00000423228 335 ntBASIC16.22■□□□□ 0.19
USP9XQ93008 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.22■□□□□ 0.19
USP9XQ93008 YBX1P5-201ENST00000509441 847 ntBASIC16.22■□□□□ 0.19
USP9XQ93008 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.22■□□□□ 0.19
USP9XQ93008 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.22■□□□□ 0.19
USP9XQ93008 AC021087.4-201ENST00000563761 564 ntBASIC16.22■□□□□ 0.19
USP9XQ93008 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP9XQ93008 MTDHP3-201ENST00000594186 672 ntBASIC16.22■□□□□ 0.19
USP9XQ93008 AC025062.2-201ENST00000605477 670 ntBASIC16.22■□□□□ 0.19
USP9XQ93008 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.22■□□□□ 0.19
USP9XQ93008 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
USP9XQ93008 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.22■□□□□ 0.19
USP9XQ93008 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
USP9XQ93008 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.21■□□□□ 0.19
USP9XQ93008 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.21■□□□□ 0.19
USP9XQ93008 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.21■□□□□ 0.19
USP9XQ93008 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP9XQ93008 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
USP9XQ93008 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
USP9XQ93008 AC099343.3-201ENST00000605834 2503 ntBASIC16.21■□□□□ 0.19
USP9XQ93008 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP9XQ93008 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.21■□□□□ 0.19
USP9XQ93008 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP9XQ93008 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP9XQ93008 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
USP9XQ93008 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP9XQ93008 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
USP9XQ93008 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.21■□□□□ 0.19
USP9XQ93008 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.21■□□□□ 0.19
USP9XQ93008 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.21■□□□□ 0.19
USP9XQ93008 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
USP9XQ93008 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.21■□□□□ 0.18
USP9XQ93008 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
USP9XQ93008 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.21■□□□□ 0.18
USP9XQ93008 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.21■□□□□ 0.18
USP9XQ93008 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
USP9XQ93008 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.21■□□□□ 0.18
USP9XQ93008 MIR3180-4-201ENST00000582223 153 ntBASIC16.21■□□□□ 0.18
USP9XQ93008 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.21■□□□□ 0.18
USP9XQ93008 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.21■□□□□ 0.18
USP9XQ93008 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms