Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM9SF4Q92544 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM9SF4Q92544 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM9SF4Q92544 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 AL671277.2-201ENST00000458060 996 ntBASIC17.62■□□□□ 0.41
TM9SF4Q92544 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.62■□□□□ 0.41
TM9SF4Q92544 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.62■□□□□ 0.41
TM9SF4Q92544 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM9SF4Q92544 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF4Q92544 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TM9SF4Q92544 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF4Q92544 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF4Q92544 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
TM9SF4Q92544 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.61■□□□□ 0.41
TM9SF4Q92544 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF4Q92544 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.61■□□□□ 0.41
TM9SF4Q92544 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF4Q92544 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TM9SF4Q92544 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF4Q92544 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TM9SF4Q92544 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF4Q92544 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF4Q92544 PCED1CP-201ENST00000419887 785 ntBASIC17.61■□□□□ 0.41
TM9SF4Q92544 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.61■□□□□ 0.41
TM9SF4Q92544 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.61■□□□□ 0.41
TM9SF4Q92544 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF4Q92544 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.61■□□□□ 0.41
TM9SF4Q92544 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.61■□□□□ 0.41
TM9SF4Q92544 AC008622.2-201ENST00000617006 1229 ntBASIC17.61■□□□□ 0.41
TM9SF4Q92544 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF4Q92544 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF4Q92544 IER3-202ENST00000376377 1350 ntBASIC17.61■□□□□ 0.41
TM9SF4Q92544 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TM9SF4Q92544 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.61■□□□□ 0.41
TM9SF4Q92544 KRT8P41-201ENST00000533985 1514 ntBASIC17.61■□□□□ 0.41
TM9SF4Q92544 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF4Q92544 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM9SF4Q92544 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TM9SF4Q92544 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.61■□□□□ 0.41
TM9SF4Q92544 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.61■□□□□ 0.41
TM9SF4Q92544 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF4Q92544 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF4Q92544 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.6■□□□□ 0.41
TM9SF4Q92544 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.6■□□□□ 0.41
TM9SF4Q92544 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF4Q92544 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF4Q92544 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF4Q92544 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.6■□□□□ 0.41
TM9SF4Q92544 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.6■□□□□ 0.41
TM9SF4Q92544 AC009947.2-201ENST00000444014 672 ntBASIC17.6■□□□□ 0.41
TM9SF4Q92544 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.6■□□□□ 0.41
TM9SF4Q92544 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.6■□□□□ 0.41
TM9SF4Q92544 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.6■□□□□ 0.41
TM9SF4Q92544 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF4Q92544 NEK4P2-201ENST00000580004 1012 ntBASIC17.6■□□□□ 0.41
TM9SF4Q92544 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.6■□□□□ 0.41
TM9SF4Q92544 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.6■□□□□ 0.41
TM9SF4Q92544 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.6■□□□□ 0.41
TM9SF4Q92544 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF4Q92544 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF4Q92544 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF4Q92544 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TM9SF4Q92544 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF4Q92544 CROCCP3-202ENST00000420820 1947 ntBASIC17.6■□□□□ 0.41
TM9SF4Q92544 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF4Q92544 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TM9SF4Q92544 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF4Q92544 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF4Q92544 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF4Q92544 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TM9SF4Q92544 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms