Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 AL032819.2-201ENST00000624543 2162 ntBASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3RF2Q8TEC5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 MIR564-202ENST00000385049 94 ntBASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SH3RF2Q8TEC5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 KRT126P-201ENST00000549467 1181 ntBASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 AL136038.4-201ENST00000603606 1261 ntBASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 KRT8P7-201ENST00000533003 1432 ntBASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 HOXB1-202ENST00000577092 1414 ntBASIC19.34■□□□□ 0.69
SH3RF2Q8TEC5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
SH3RF2Q8TEC5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SH3RF2Q8TEC5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SH3RF2Q8TEC5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.33■□□□□ 0.69
SH3RF2Q8TEC5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SH3RF2Q8TEC5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SH3RF2Q8TEC5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SH3RF2Q8TEC5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
SH3RF2Q8TEC5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SH3RF2Q8TEC5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SH3RF2Q8TEC5 ATP5G2P1-201ENST00000433580 426 ntBASIC19.33■□□□□ 0.68
SH3RF2Q8TEC5 HLA-F-220ENST00000434407 884 ntBASIC19.33■□□□□ 0.68
SH3RF2Q8TEC5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.33■□□□□ 0.68
SH3RF2Q8TEC5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.33■□□□□ 0.68
SH3RF2Q8TEC5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.33■□□□□ 0.68
SH3RF2Q8TEC5 AC011498.5-201ENST00000592027 486 ntBASIC19.33■□□□□ 0.68
SH3RF2Q8TEC5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SH3RF2Q8TEC5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.33■□□□□ 0.68
SH3RF2Q8TEC5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SH3RF2Q8TEC5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SH3RF2Q8TEC5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SH3RF2Q8TEC5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
SH3RF2Q8TEC5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms