Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 UNC93B2-201ENST00000285383 730 ntBASIC17.5■□□□□ 0.39
NUP43Q8NFH3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 RBM17P1-201ENST00000453646 1190 ntBASIC17.49■□□□□ 0.39
NUP43Q8NFH3 SNORA78-201ENST00000459373 127 ntBASIC17.49■□□□□ 0.39
NUP43Q8NFH3 CA15P1-201ENST00000481698 905 ntBASIC17.49■□□□□ 0.39
NUP43Q8NFH3 AC126763.1-201ENST00000552015 2118 ntBASIC17.49■□□□□ 0.39
NUP43Q8NFH3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUP43Q8NFH3 AL499627.1-201ENST00000569373 2188 ntBASIC17.49■□□□□ 0.39
NUP43Q8NFH3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 AP005242.2-201ENST00000580065 1175 ntBASIC17.48■□□□□ 0.39
NUP43Q8NFH3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 AL109659.2-201ENST00000606809 1674 ntBASIC17.48■□□□□ 0.39
NUP43Q8NFH3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUP43Q8NFH3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUP43Q8NFH3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
NUP43Q8NFH3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NUP43Q8NFH3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUP43Q8NFH3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUP43Q8NFH3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
NUP43Q8NFH3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NUP43Q8NFH3 AC008556.1-201ENST00000610908 2040 ntBASIC17.47■□□□□ 0.39
NUP43Q8NFH3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.47■□□□□ 0.39
NUP43Q8NFH3 BCL2-203ENST00000589955 5011 ntBASIC17.47■□□□□ 0.39
NUP43Q8NFH3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUP43Q8NFH3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.47■□□□□ 0.39
NUP43Q8NFH3 AL023284.2-201ENST00000405850 579 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms