Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 ECEL1P3-201ENST00000427961 737 ntBASIC19.19■□□□□ 0.66
PAF1Q8N7H5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PAF1Q8N7H5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 AC141586.3-201ENST00000562166 1838 ntBASIC19.18■□□□□ 0.66
PAF1Q8N7H5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 CYP2D8P-201ENST00000433633 1490 ntBASIC19.18■□□□□ 0.66
PAF1Q8N7H5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 AC211429.1-201ENST00000415277 523 ntBASIC19.18■□□□□ 0.66
PAF1Q8N7H5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 KRT18P22-201ENST00000402024 1347 ntBASIC19.18■□□□□ 0.66
PAF1Q8N7H5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PAF1Q8N7H5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 AC005332.7-201ENST00000614046 2005 ntBASIC19.17■□□□□ 0.66
PAF1Q8N7H5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PAF1Q8N7H5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.16■□□□□ 0.66
PAF1Q8N7H5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PAF1Q8N7H5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms