Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 KRT18P23-201ENST00000435622 1283 ntBASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 TOB2P1-201ENST00000469761 992 ntBASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 KRT18P31-201ENST00000506277 1292 ntBASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 AL732292.2-201ENST00000609649 430 ntBASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 AL031008.1-201ENST00000619963 541 ntBASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 AC104819.1-201ENST00000504587 486 ntBASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 MIR3180-4-201ENST00000582223 153 ntBASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 AC010240.3-201ENST00000607688 395 ntBASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.96■□□□□ 0.63
SYNPOQ8N3V7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 AC009078.2-202ENST00000463353 338 ntBASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 FOSL1P1-201ENST00000511041 816 ntBASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 AC106795.1-205ENST00000512851 1056 ntBASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 AL662844.1-201ENST00000546340 181 ntBASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNPOQ8N3V7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 Z83836.1-201ENST00000624605 1642 ntBASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 AP000347.1-202ENST00000435868 847 ntBASIC18.94■□□□□ 0.62
SYNPOQ8N3V7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms