Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 MIR149-201ENST00000384879 89 ntBASIC29.15■■■□□ 2.26
VPS8Q8N3P4 FXN-203ENST00000396366 922 ntTSL 2 BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
VPS8Q8N3P4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
VPS8Q8N3P4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC29.14■■■□□ 2.26
VPS8Q8N3P4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
VPS8Q8N3P4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
VPS8Q8N3P4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
VPS8Q8N3P4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
VPS8Q8N3P4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC29.14■■■□□ 2.26
VPS8Q8N3P4 MIR662-201ENST00000384847 95 ntBASIC29.14■■■□□ 2.26
VPS8Q8N3P4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC29.14■■■□□ 2.26
VPS8Q8N3P4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
VPS8Q8N3P4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
VPS8Q8N3P4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC29.14■■■□□ 2.26
VPS8Q8N3P4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
VPS8Q8N3P4 AL162741.1-201ENST00000565563 1558 ntBASIC29.14■■■□□ 2.26
VPS8Q8N3P4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
VPS8Q8N3P4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC29.13■■■□□ 2.25
VPS8Q8N3P4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC29.13■■■□□ 2.25
VPS8Q8N3P4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC29.13■■■□□ 2.25
VPS8Q8N3P4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC29.13■■■□□ 2.25
VPS8Q8N3P4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC29.13■■■□□ 2.25
VPS8Q8N3P4 MYLKP1-201ENST00000509077 1580 ntBASIC29.13■■■□□ 2.25
VPS8Q8N3P4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
VPS8Q8N3P4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
VPS8Q8N3P4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
VPS8Q8N3P4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC29.13■■■□□ 2.25
VPS8Q8N3P4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
VPS8Q8N3P4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
VPS8Q8N3P4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
VPS8Q8N3P4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
VPS8Q8N3P4 AC112777.1-201ENST00000540175 1423 ntBASIC29.12■■■□□ 2.25
VPS8Q8N3P4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC29.12■■■□□ 2.25
VPS8Q8N3P4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
VPS8Q8N3P4 AC009065.1-201ENST00000564055 1225 ntBASIC29.12■■■□□ 2.25
VPS8Q8N3P4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC29.12■■■□□ 2.25
VPS8Q8N3P4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
VPS8Q8N3P4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC29.11■■■□□ 2.25
VPS8Q8N3P4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
VPS8Q8N3P4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
VPS8Q8N3P4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC29.1■■■□□ 2.25
VPS8Q8N3P4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
VPS8Q8N3P4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC29.1■■■□□ 2.25
VPS8Q8N3P4 AP000974.1-201ENST00000623909 2387 ntBASIC29.1■■■□□ 2.25
VPS8Q8N3P4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC29.1■■■□□ 2.25
VPS8Q8N3P4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
VPS8Q8N3P4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC29.1■■■□□ 2.25
VPS8Q8N3P4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
VPS8Q8N3P4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC29.1■■■□□ 2.25
VPS8Q8N3P4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC29.1■■■□□ 2.25
VPS8Q8N3P4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC29.1■■■□□ 2.25
VPS8Q8N3P4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
VPS8Q8N3P4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC29.09■■■□□ 2.25
VPS8Q8N3P4 SDHAP2-201ENST00000455183 2001 ntBASIC29.09■■■□□ 2.25
VPS8Q8N3P4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC29.09■■■□□ 2.25
VPS8Q8N3P4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
VPS8Q8N3P4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
VPS8Q8N3P4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC29.09■■■□□ 2.25
VPS8Q8N3P4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms