Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 AC026471.5-201ENST00000615068 467 ntBASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC23.09■■□□□ 1.29
CHD1LQ86WJ1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC23.09■■□□□ 1.29
CHD1LQ86WJ1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD1LQ86WJ1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.09■■□□□ 1.29
CHD1LQ86WJ1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.09■■□□□ 1.29
CHD1LQ86WJ1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.09■■□□□ 1.29
CHD1LQ86WJ1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.09■■□□□ 1.29
CHD1LQ86WJ1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.09■■□□□ 1.29
CHD1LQ86WJ1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.09■■□□□ 1.29
CHD1LQ86WJ1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CHD1LQ86WJ1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD1LQ86WJ1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CHD1LQ86WJ1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD1LQ86WJ1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 ABALON-201ENST00000629058 1903 ntBASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 AL355355.2-201ENST00000442321 338 ntBASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 KRT18P41-201ENST00000518924 1277 ntBASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC23.08■■□□□ 1.29
CHD1LQ86WJ1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CHD1LQ86WJ1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CHD1LQ86WJ1 NOC2LP1-202ENST00000452600 2235 ntBASIC23.08■■□□□ 1.28
CHD1LQ86WJ1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CHD1LQ86WJ1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 AL162741.1-201ENST00000565563 1558 ntBASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 CRYGFP-201ENST00000418459 633 ntBASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD1LQ86WJ1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 MIR564-202ENST00000385049 94 ntBASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 CA15P1-201ENST00000481698 905 ntBASIC23.06■■□□□ 1.28
CHD1LQ86WJ1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms