Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 CD63-204ENST00000546939 779 ntTSL 3 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 AC027601.4-201ENST00000611259 610 ntBASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC11.53□□□□□ -0.56
VPS13BQ7Z7G8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC11.52□□□□□ -0.56
VPS13BQ7Z7G8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
VPS13BQ7Z7G8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC11.52□□□□□ -0.56
VPS13BQ7Z7G8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
VPS13BQ7Z7G8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
VPS13BQ7Z7G8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.52□□□□□ -0.56
VPS13BQ7Z7G8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
VPS13BQ7Z7G8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
VPS13BQ7Z7G8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
VPS13BQ7Z7G8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
VPS13BQ7Z7G8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
VPS13BQ7Z7G8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
VPS13BQ7Z7G8 MIR1233-2-201ENST00000408138 82 ntBASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 MIR1233-1-201ENST00000408722 82 ntBASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 PMS2P7-201ENST00000506558 1336 ntBASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 CCS-201ENST00000310190 942 ntTSL 5 BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 BNIP3P18-201ENST00000593976 575 ntBASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 TERC-201ENST00000602385 541 ntBASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 AL136038.4-201ENST00000603606 1261 ntBASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 AC148477.8-201ENST00000624298 468 ntBASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 FAM215A-202ENST00000632077 792 ntBASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13BQ7Z7G8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 GRAMD4P1-201ENST00000435181 1110 ntBASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 AP001005.1-201ENST00000571755 1248 ntBASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 AL592071.1-201ENST00000611956 408 ntBASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 TP73-AS1-207ENST00000624167 988 ntBASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 AC139887.3-201ENST00000568585 713 ntBASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 AL591684.3-201ENST00000605187 298 ntBASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 AC010240.3-201ENST00000607688 395 ntBASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13BQ7Z7G8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms