Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.77■□□□□ 0.59
LYSMD3Q7Z3D4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 KRT18P21-201ENST00000515767 1272 ntBASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 MIR3180-5-201ENST00000583743 153 ntBASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD3Q7Z3D4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 AC093503.3-201ENST00000624917 2352 ntBASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 AC010203.1-204ENST00000548782 407 ntBASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD3Q7Z3D4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 AL357033.4-201ENST00000617703 1807 ntBASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 RCN1P1-201ENST00000400413 996 ntBASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 AC113347.1-201ENST00000413321 391 ntBASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 AC010331.1-201ENST00000611423 582 ntBASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD3Q7Z3D4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 AC093525.10-201ENST00000625130 1569 ntBASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD3Q7Z3D4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms