Protein–RNA interactions for Protein: Q6UWE0

LRSAM1, E3 ubiquitin-protein ligase LRSAM1, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRSAM1Q6UWE0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 FAM201B-201ENST00000458407 597 ntBASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 RPS2P52-201ENST00000469610 820 ntBASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRSAM1Q6UWE0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 TSPY23P-201ENST00000440136 739 ntBASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 KRT18P6-201ENST00000555540 1265 ntBASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 AC108860.2-201ENST00000562760 2183 ntBASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 AC105036.2-201ENST00000569468 176 ntBASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 AC124067.4-201ENST00000519691 2379 ntBASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRSAM1Q6UWE0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 LSM12P1-201ENST00000411836 588 ntBASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 AC133552.2-202ENST00000575694 574 ntBASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.24■□□□□ 0.99
LRSAM1Q6UWE0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 RCC2P6-201ENST00000526625 1557 ntBASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 AL050303.2-201ENST00000619798 666 ntBASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 REXO1L9P-201ENST00000604264 2108 ntBASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.23■□□□□ 0.99
LRSAM1Q6UWE0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRSAM1Q6UWE0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.22■□□□□ 0.99
LRSAM1Q6UWE0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRSAM1Q6UWE0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.22■□□□□ 0.99
LRSAM1Q6UWE0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.22■□□□□ 0.99
LRSAM1Q6UWE0 TUBB8P6-201ENST00000436895 1288 ntBASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms