Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
RNF43Q68DV7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF43Q68DV7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF43Q68DV7 AL138966.2-201ENST00000621997 464 ntBASIC19.59■□□□□ 0.73
RNF43Q68DV7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF43Q68DV7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RNF43Q68DV7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF43Q68DV7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF43Q68DV7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RNF43Q68DV7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF43Q68DV7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF43Q68DV7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF43Q68DV7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF43Q68DV7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF43Q68DV7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF43Q68DV7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF43Q68DV7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF43Q68DV7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF43Q68DV7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF43Q68DV7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF43Q68DV7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF43Q68DV7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.58■□□□□ 0.73
RNF43Q68DV7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF43Q68DV7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF43Q68DV7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF43Q68DV7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF43Q68DV7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF43Q68DV7 AC063952.2-201ENST00000498792 1227 ntBASIC19.58■□□□□ 0.72
RNF43Q68DV7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.58■□□□□ 0.72
RNF43Q68DV7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF43Q68DV7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF43Q68DV7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF43Q68DV7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF43Q68DV7 AL390961.4-201ENST00000623958 2535 ntBASIC19.58■□□□□ 0.72
RNF43Q68DV7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF43Q68DV7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RNF43Q68DV7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF43Q68DV7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RNF43Q68DV7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF43Q68DV7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF43Q68DV7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF43Q68DV7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF43Q68DV7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF43Q68DV7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF43Q68DV7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF43Q68DV7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF43Q68DV7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF43Q68DV7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF43Q68DV7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF43Q68DV7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF43Q68DV7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF43Q68DV7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.57■□□□□ 0.72
RNF43Q68DV7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF43Q68DV7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF43Q68DV7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF43Q68DV7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF43Q68DV7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF43Q68DV7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF43Q68DV7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF43Q68DV7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF43Q68DV7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RNF43Q68DV7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF43Q68DV7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF43Q68DV7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF43Q68DV7 AC009113.1-201ENST00000570267 2443 ntBASIC19.56■□□□□ 0.72
RNF43Q68DV7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF43Q68DV7 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.56■□□□□ 0.72
RNF43Q68DV7 AC120498.9-201ENST00000339021 3867 ntBASIC19.56■□□□□ 0.72
RNF43Q68DV7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF43Q68DV7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF43Q68DV7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF43Q68DV7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RNF43Q68DV7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF43Q68DV7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.56■□□□□ 0.72
RNF43Q68DV7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF43Q68DV7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF43Q68DV7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF43Q68DV7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
RNF43Q68DV7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF43Q68DV7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF43Q68DV7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF43Q68DV7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RNF43Q68DV7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF43Q68DV7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF43Q68DV7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms