Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.63■□□□□ 0.41
LPCAT4Q643R3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LPCAT4Q643R3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LPCAT4Q643R3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LPCAT4Q643R3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LPCAT4Q643R3 MYCNOS-205ENST00000641950 531 ntBASIC17.62■□□□□ 0.41
LPCAT4Q643R3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
LPCAT4Q643R3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.62■□□□□ 0.41
LPCAT4Q643R3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.62■□□□□ 0.41
LPCAT4Q643R3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LPCAT4Q643R3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LPCAT4Q643R3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.62■□□□□ 0.41
LPCAT4Q643R3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LPCAT4Q643R3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LPCAT4Q643R3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LPCAT4Q643R3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 OR6D1P-202ENST00000641007 5290 ntBASIC17.6■□□□□ 0.41
LPCAT4Q643R3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 AL139246.5-201ENST00000606645 996 ntBASIC17.6■□□□□ 0.41
LPCAT4Q643R3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 AL118508.1-201ENST00000613502 2345 ntBASIC17.6■□□□□ 0.41
LPCAT4Q643R3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.6■□□□□ 0.41
LPCAT4Q643R3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 AC123595.1-201ENST00000440769 1046 ntBASIC17.59■□□□□ 0.41
LPCAT4Q643R3 C2orf69P4-201ENST00000565394 541 ntBASIC17.59■□□□□ 0.41
LPCAT4Q643R3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LPCAT4Q643R3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms