Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC28.25■■■□□ 2.11
CDC42BPAQ5VT25 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC28.25■■■□□ 2.11
CDC42BPAQ5VT25 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
CDC42BPAQ5VT25 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CDC42BPAQ5VT25 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDC42BPAQ5VT25 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDC42BPAQ5VT25 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDC42BPAQ5VT25 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 DFFB-203ENST00000341385 572 ntTSL 5 BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 AC008608.2-201ENST00000606089 416 ntBASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 AC243591.1-201ENST00000452967 1364 ntBASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CDC42BPAQ5VT25 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC28.23■■■□□ 2.11
CDC42BPAQ5VT25 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CDC42BPAQ5VT25 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC28.22■■■□□ 2.11
CDC42BPAQ5VT25 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
CDC42BPAQ5VT25 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDC42BPAQ5VT25 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDC42BPAQ5VT25 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC28.22■■■□□ 2.11
CDC42BPAQ5VT25 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC28.22■■■□□ 2.11
CDC42BPAQ5VT25 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
CDC42BPAQ5VT25 AC096582.2-201ENST00000510860 516 ntBASIC28.22■■■□□ 2.11
CDC42BPAQ5VT25 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
CDC42BPAQ5VT25 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC28.22■■■□□ 2.11
CDC42BPAQ5VT25 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC28.22■■■□□ 2.11
CDC42BPAQ5VT25 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC28.22■■■□□ 2.11
CDC42BPAQ5VT25 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDC42BPAQ5VT25 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 TPM1-218ENST00000559281 851 ntTSL 5 BASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 AC006538.3-201ENST00000612495 578 ntBASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 AC148477.8-201ENST00000624298 468 ntBASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 UROS-202ENST00000368778 1556 ntTSL 2 BASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 KRT18P67-201ENST00000432816 1264 ntBASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 AC079776.4-201ENST00000511039 504 ntBASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 IGHV3-41-201ENST00000613121 348 ntBASIC28.21■■■□□ 2.11
CDC42BPAQ5VT25 CLDN5-201ENST00000403084 2357 ntBASIC28.2■■■□□ 2.11
CDC42BPAQ5VT25 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
CDC42BPAQ5VT25 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CDC42BPAQ5VT25 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC28.2■■■□□ 2.11
CDC42BPAQ5VT25 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CDC42BPAQ5VT25 CCS-201ENST00000310190 942 ntTSL 5 BASIC28.2■■■□□ 2.1
CDC42BPAQ5VT25 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.1
CDC42BPAQ5VT25 PMS2P1-201ENST00000431037 1228 ntBASIC28.2■■■□□ 2.1
CDC42BPAQ5VT25 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC28.2■■■□□ 2.1
CDC42BPAQ5VT25 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC28.2■■■□□ 2.1
CDC42BPAQ5VT25 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC28.2■■■□□ 2.1
CDC42BPAQ5VT25 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC28.2■■■□□ 2.1
CDC42BPAQ5VT25 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC28.2■■■□□ 2.1
CDC42BPAQ5VT25 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC28.2■■■□□ 2.1
CDC42BPAQ5VT25 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms