Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.58■■□□□ 1.21
RFX7Q2KHR2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.58■■□□□ 1.21
RFX7Q2KHR2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.58■■□□□ 1.21
RFX7Q2KHR2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RFX7Q2KHR2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
RFX7Q2KHR2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
RFX7Q2KHR2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RFX7Q2KHR2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC22.58■■□□□ 1.21
RFX7Q2KHR2 ZNF444P1-201ENST00000559497 298 ntBASIC22.58■■□□□ 1.21
RFX7Q2KHR2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
RFX7Q2KHR2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RFX7Q2KHR2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
RFX7Q2KHR2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 VENTXP5-201ENST00000523979 775 ntBASIC22.57■■□□□ 1.2
RFX7Q2KHR2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 AC087289.5-201ENST00000586076 3175 ntBASIC22.57■■□□□ 1.2
RFX7Q2KHR2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFX7Q2KHR2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 HOXB1-202ENST00000577092 1414 ntBASIC22.56■■□□□ 1.2
RFX7Q2KHR2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
RFX7Q2KHR2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC22.55■■□□□ 1.2
RFX7Q2KHR2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 AC034236.2-201ENST00000606662 1610 ntBASIC22.55■■□□□ 1.2
RFX7Q2KHR2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.55■■□□□ 1.2
RFX7Q2KHR2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.54■■□□□ 1.2
RFX7Q2KHR2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFX7Q2KHR2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFX7Q2KHR2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFX7Q2KHR2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFX7Q2KHR2 HBZP1-201ENST00000354915 429 ntBASIC22.54■■□□□ 1.2
RFX7Q2KHR2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFX7Q2KHR2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.54■■□□□ 1.2
RFX7Q2KHR2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFX7Q2KHR2 AP000593.1-201ENST00000393668 712 ntBASIC22.54■■□□□ 1.2
RFX7Q2KHR2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.54■■□□□ 1.2
RFX7Q2KHR2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RFX7Q2KHR2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC22.54■■□□□ 1.2
RFX7Q2KHR2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RFX7Q2KHR2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFX7Q2KHR2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFX7Q2KHR2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFX7Q2KHR2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RFX7Q2KHR2 LINC01311-201ENST00000565162 1445 ntBASIC22.53■■□□□ 1.2
RFX7Q2KHR2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RFX7Q2KHR2 DUSP5P1-201ENST00000441325 1139 ntBASIC22.53■■□□□ 1.2
RFX7Q2KHR2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.53■■□□□ 1.2
RFX7Q2KHR2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RFX7Q2KHR2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RFX7Q2KHR2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RFX7Q2KHR2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms