Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL1Q00532 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.39■□□□□ 0.53
CDKL1Q00532 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL1Q00532 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.39■□□□□ 0.53
CDKL1Q00532 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CDKL1Q00532 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CDKL1Q00532 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL1Q00532 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL1Q00532 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL1Q00532 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL1Q00532 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDKL1Q00532 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.39■□□□□ 0.53
CDKL1Q00532 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL1Q00532 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.39■□□□□ 0.53
CDKL1Q00532 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CDKL1Q00532 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL1Q00532 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CDKL1Q00532 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL1Q00532 AC090164.3-201ENST00000610780 2143 ntBASIC18.38■□□□□ 0.53
CDKL1Q00532 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CDKL1Q00532 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL1Q00532 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL1Q00532 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL1Q00532 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL1Q00532 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDKL1Q00532 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL1Q00532 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CDKL1Q00532 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL1Q00532 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL1Q00532 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL1Q00532 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDKL1Q00532 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.38■□□□□ 0.53
CDKL1Q00532 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.38■□□□□ 0.53
CDKL1Q00532 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.38■□□□□ 0.53
CDKL1Q00532 TMEM191A-211ENST00000637163 1067 ntBASIC18.38■□□□□ 0.53
CDKL1Q00532 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.38■□□□□ 0.53
CDKL1Q00532 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.38■□□□□ 0.53
CDKL1Q00532 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL1Q00532 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL1Q00532 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.38■□□□□ 0.53
CDKL1Q00532 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL1Q00532 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.38■□□□□ 0.53
CDKL1Q00532 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL1Q00532 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.38■□□□□ 0.53
CDKL1Q00532 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDKL1Q00532 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL1Q00532 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL1Q00532 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL1Q00532 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDKL1Q00532 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDKL1Q00532 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.37■□□□□ 0.53
CDKL1Q00532 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.37■□□□□ 0.53
CDKL1Q00532 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.37■□□□□ 0.53
CDKL1Q00532 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.37■□□□□ 0.53
CDKL1Q00532 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.37■□□□□ 0.53
CDKL1Q00532 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.37■□□□□ 0.53
CDKL1Q00532 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.37■□□□□ 0.53
CDKL1Q00532 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.37■□□□□ 0.53
CDKL1Q00532 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
CDKL1Q00532 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.37■□□□□ 0.53
CDKL1Q00532 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL1Q00532 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDKL1Q00532 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.37■□□□□ 0.53
CDKL1Q00532 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL1Q00532 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
CDKL1Q00532 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDKL1Q00532 ANO7L1-203ENST00000602586 1720 ntBASIC18.37■□□□□ 0.53
CDKL1Q00532 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.37■□□□□ 0.53
CDKL1Q00532 AL354751.1-201ENST00000412768 1863 ntBASIC18.37■□□□□ 0.53
CDKL1Q00532 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDKL1Q00532 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
CDKL1Q00532 WIZP1-201ENST00000531444 2299 ntBASIC18.37■□□□□ 0.53
CDKL1Q00532 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL1Q00532 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDKL1Q00532 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CDKL1Q00532 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL1Q00532 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL1Q00532 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL1Q00532 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDKL1Q00532 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL1Q00532 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKL1Q00532 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKL1Q00532 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL1Q00532 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL1Q00532 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKL1Q00532 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKL1Q00532 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKL1Q00532 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL1Q00532 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKL1Q00532 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.36■□□□□ 0.53
CDKL1Q00532 BICD1-207ENST00000551848 1962 ntBASIC18.36■□□□□ 0.53
CDKL1Q00532 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKL1Q00532 Z99916.2-201ENST00000604037 246 ntBASIC18.36■□□□□ 0.53
CDKL1Q00532 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKL1Q00532 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL1Q00532 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDKL1Q00532 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL1Q00532 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDKL1Q00532 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKL1Q00532 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms