Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
HIST1H3AP68431 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HIST1H3AP68431 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.33■□□□□ 0.21
HIST1H3AP68431 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.33■□□□□ 0.21
HIST1H3AP68431 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HIST1H3AP68431 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HIST1H3AP68431 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HIST1H3AP68431 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
HIST1H3AP68431 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HIST1H3AP68431 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HIST1H3AP68431 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
HIST1H3AP68431 AC126763.1-201ENST00000552015 2118 ntBASIC16.33■□□□□ 0.21
HIST1H3AP68431 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H3AP68431 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HIST1H3AP68431 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HIST1H3AP68431 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.33■□□□□ 0.2
HIST1H3AP68431 MCCD1P1-208ENST00000445732 328 ntBASIC16.33■□□□□ 0.2
HIST1H3AP68431 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
HIST1H3AP68431 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HIST1H3AP68431 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H3AP68431 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.33■□□□□ 0.2
HIST1H3AP68431 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H3AP68431 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H3AP68431 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.33■□□□□ 0.2
HIST1H3AP68431 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.33■□□□□ 0.2
HIST1H3AP68431 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H3AP68431 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H3AP68431 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H3AP68431 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
HIST1H3AP68431 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
HIST1H3AP68431 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H3AP68431 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H3AP68431 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H3AP68431 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H3AP68431 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HIST1H3AP68431 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HIST1H3AP68431 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST1H3AP68431 AC104581.1-202ENST00000635932 2618 ntBASIC16.32■□□□□ 0.2
HIST1H3AP68431 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H3AP68431 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H3AP68431 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H3AP68431 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H3AP68431 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H3AP68431 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H3AP68431 KRT17P2-201ENST00000300992 1314 ntBASIC16.32■□□□□ 0.2
HIST1H3AP68431 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H3AP68431 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST1H3AP68431 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H3AP68431 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H3AP68431 SLC25A1P2-201ENST00000430693 912 ntBASIC16.32■□□□□ 0.2
HIST1H3AP68431 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HIST1H3AP68431 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST1H3AP68431 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST1H3AP68431 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST1H3AP68431 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST1H3AP68431 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST1H3AP68431 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H3AP68431 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HIST1H3AP68431 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H3AP68431 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 TSPY17P-201ENST00000450329 467 ntBASIC16.31■□□□□ 0.2
HIST1H3AP68431 SNORA78-201ENST00000459373 127 ntBASIC16.31■□□□□ 0.2
HIST1H3AP68431 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 MIR4674-201ENST00000582457 87 ntBASIC16.31■□□□□ 0.2
HIST1H3AP68431 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 AP000525.1-201ENST00000608286 694 ntBASIC16.31■□□□□ 0.2
HIST1H3AP68431 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 BICD1-207ENST00000551848 1962 ntBASIC16.31■□□□□ 0.2
HIST1H3AP68431 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H3AP68431 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST1H3AP68431 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H3AP68431 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms