Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
YBX1P67809 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YBX1P67809 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YBX1P67809 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
YBX1P67809 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.22■□□□□ 0.51
YBX1P67809 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
YBX1P67809 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.22■□□□□ 0.51
YBX1P67809 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.22■□□□□ 0.51
YBX1P67809 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YBX1P67809 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBX1P67809 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBX1P67809 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YBX1P67809 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.22■□□□□ 0.51
YBX1P67809 ECEL1P2-202ENST00000465689 757 ntBASIC18.22■□□□□ 0.51
YBX1P67809 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.22■□□□□ 0.51
YBX1P67809 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.22■□□□□ 0.51
YBX1P67809 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
YBX1P67809 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBX1P67809 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBX1P67809 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YBX1P67809 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
YBX1P67809 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
YBX1P67809 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBX1P67809 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBX1P67809 LINC01568-207ENST00000641790 1380 ntBASIC18.21■□□□□ 0.51
YBX1P67809 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.21■□□□□ 0.51
YBX1P67809 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBX1P67809 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBX1P67809 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
YBX1P67809 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBX1P67809 TSPY14P-201ENST00000303979 915 ntBASIC18.21■□□□□ 0.51
YBX1P67809 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YBX1P67809 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
YBX1P67809 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBX1P67809 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.21■□□□□ 0.51
YBX1P67809 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.21■□□□□ 0.51
YBX1P67809 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YBX1P67809 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.21■□□□□ 0.51
YBX1P67809 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.21■□□□□ 0.51
YBX1P67809 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
YBX1P67809 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.21■□□□□ 0.51
YBX1P67809 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.21■□□□□ 0.51
YBX1P67809 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.21■□□□□ 0.51
YBX1P67809 MIR4674-201ENST00000582457 87 ntBASIC18.21■□□□□ 0.51
YBX1P67809 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.21■□□□□ 0.51
YBX1P67809 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.21■□□□□ 0.51
YBX1P67809 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBX1P67809 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBX1P67809 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.21■□□□□ 0.51
YBX1P67809 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBX1P67809 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
YBX1P67809 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBX1P67809 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
YBX1P67809 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
YBX1P67809 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.21■□□□□ 0.51
YBX1P67809 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBX1P67809 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
YBX1P67809 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
YBX1P67809 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.2■□□□□ 0.5
YBX1P67809 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
YBX1P67809 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YBX1P67809 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
YBX1P67809 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.2■□□□□ 0.5
YBX1P67809 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YBX1P67809 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YBX1P67809 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
YBX1P67809 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YBX1P67809 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.2■□□□□ 0.5
YBX1P67809 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
YBX1P67809 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.2■□□□□ 0.5
YBX1P67809 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.2■□□□□ 0.5
YBX1P67809 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
YBX1P67809 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.2■□□□□ 0.5
YBX1P67809 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.2■□□□□ 0.5
YBX1P67809 AC007663.1-201ENST00000438948 1240 ntBASIC18.2■□□□□ 0.5
YBX1P67809 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.2■□□□□ 0.5
YBX1P67809 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.2■□□□□ 0.5
YBX1P67809 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.2■□□□□ 0.5
YBX1P67809 C2orf69P3-201ENST00000565542 1120 ntBASIC18.2■□□□□ 0.5
YBX1P67809 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.2■□□□□ 0.5
YBX1P67809 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YBX1P67809 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YBX1P67809 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YBX1P67809 AC092338.2-201ENST00000568827 1415 ntBASIC18.2■□□□□ 0.5
YBX1P67809 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.2■□□□□ 0.5
YBX1P67809 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
YBX1P67809 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
YBX1P67809 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YBX1P67809 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
YBX1P67809 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YBX1P67809 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.2■□□□□ 0.5
YBX1P67809 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
YBX1P67809 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
YBX1P67809 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
YBX1P67809 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.19■□□□□ 0.5
YBX1P67809 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
YBX1P67809 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.19■□□□□ 0.5
YBX1P67809 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
YBX1P67809 AC068880.1-201ENST00000507289 2297 ntBASIC18.19■□□□□ 0.5
YBX1P67809 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms