Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB11AP62491 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.18■□□□□ 0.02
RAB11AP62491 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB11AP62491 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB11AP62491 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB11AP62491 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RAB11AP62491 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB11AP62491 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB11AP62491 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB11AP62491 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RAB11AP62491 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB11AP62491 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RAB11AP62491 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB11AP62491 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RAB11AP62491 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RAB11AP62491 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB11AP62491 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB11AP62491 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB11AP62491 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
RAB11AP62491 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB11AP62491 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RAB11AP62491 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB11AP62491 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB11AP62491 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RAB11AP62491 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
RAB11AP62491 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB11AP62491 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB11AP62491 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB11AP62491 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RAB11AP62491 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 ABALON-201ENST00000629058 1903 ntBASIC15.17■□□□□ 0.02
RAB11AP62491 AC124283.5-201ENST00000624661 1809 ntBASIC15.17■□□□□ 0.02
RAB11AP62491 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RAB11AP62491 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB11AP62491 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RAB11AP62491 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RAB11AP62491 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB11AP62491 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB11AP62491 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB11AP62491 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB11AP62491 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB11AP62491 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAB11AP62491 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB11AP62491 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB11AP62491 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB11AP62491 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB11AP62491 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.16■□□□□ 0.02
RAB11AP62491 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAB11AP62491 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAB11AP62491 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
RAB11AP62491 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB11AP62491 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAB11AP62491 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RAB11AP62491 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RAB11AP62491 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB11AP62491 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms