Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.51■□□□□ 0.39
RPS3AP61247 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RPS3AP61247 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS3AP61247 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.51■□□□□ 0.39
RPS3AP61247 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RPS3AP61247 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RPS3AP61247 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RPS3AP61247 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RPS3AP61247 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS3AP61247 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.51■□□□□ 0.39
RPS3AP61247 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.51■□□□□ 0.39
RPS3AP61247 AL355355.2-201ENST00000442321 338 ntBASIC17.51■□□□□ 0.39
RPS3AP61247 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPS3AP61247 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.51■□□□□ 0.39
RPS3AP61247 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
RPS3AP61247 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS3AP61247 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.51■□□□□ 0.39
RPS3AP61247 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.51■□□□□ 0.39
RPS3AP61247 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RPS3AP61247 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RPS3AP61247 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RPS3AP61247 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.5■□□□□ 0.39
RPS3AP61247 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.5■□□□□ 0.39
RPS3AP61247 AL354751.1-201ENST00000412768 1863 ntBASIC17.5■□□□□ 0.39
RPS3AP61247 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.5■□□□□ 0.39
RPS3AP61247 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RPS3AP61247 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RPS3AP61247 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 KRT16P1-201ENST00000399124 1418 ntBASIC17.5■□□□□ 0.39
RPS3AP61247 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RPS3AP61247 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.5■□□□□ 0.39
RPS3AP61247 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 FAM197Y1-201ENST00000421178 764 ntBASIC17.5■□□□□ 0.39
RPS3AP61247 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.5■□□□□ 0.39
RPS3AP61247 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.5■□□□□ 0.39
RPS3AP61247 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RPS3AP61247 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 AC006333.2-201ENST00000607957 2099 ntBASIC17.5■□□□□ 0.39
RPS3AP61247 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS3AP61247 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RPS3AP61247 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS3AP61247 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS3AP61247 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.49■□□□□ 0.39
RPS3AP61247 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
RPS3AP61247 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RPS3AP61247 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS3AP61247 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS3AP61247 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS3AP61247 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 CR392000.1-201ENST00000624770 1228 ntBASIC17.49■□□□□ 0.39
RPS3AP61247 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
RPS3AP61247 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RPS3AP61247 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS3AP61247 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS3AP61247 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS3AP61247 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS3AP61247 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
RPS3AP61247 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.48■□□□□ 0.39
RPS3AP61247 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
RPS3AP61247 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RPS3AP61247 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPS3AP61247 TSPY7P-201ENST00000431358 1114 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms