Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS3P61009 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS3P61009 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS3P61009 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SPCS3P61009 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS3P61009 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.22■□□□□ 0.03
SPCS3P61009 AC073592.3-201ENST00000625118 1834 ntBASIC15.22■□□□□ 0.03
SPCS3P61009 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS3P61009 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS3P61009 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.22■□□□□ 0.03
SPCS3P61009 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS3P61009 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS3P61009 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS3P61009 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS3P61009 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SPCS3P61009 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.21■□□□□ 0.03
SPCS3P61009 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
SPCS3P61009 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SPCS3P61009 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SPCS3P61009 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.21■□□□□ 0.03
SPCS3P61009 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SPCS3P61009 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.21■□□□□ 0.03
SPCS3P61009 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS3P61009 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS3P61009 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS3P61009 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS3P61009 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.21■□□□□ 0.03
SPCS3P61009 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS3P61009 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS3P61009 AC018470.1-201ENST00000624790 3129 ntBASIC15.21■□□□□ 0.03
SPCS3P61009 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS3P61009 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS3P61009 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.21■□□□□ 0.03
SPCS3P61009 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.21■□□□□ 0.03
SPCS3P61009 MYC-209ENST00000641252 345 ntBASIC15.21■□□□□ 0.03
SPCS3P61009 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS3P61009 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS3P61009 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.21■□□□□ 0.03
SPCS3P61009 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS3P61009 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SPCS3P61009 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS3P61009 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS3P61009 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
SPCS3P61009 ABALON-201ENST00000629058 1903 ntBASIC15.21■□□□□ 0.02
SPCS3P61009 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SPCS3P61009 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.21■□□□□ 0.02
SPCS3P61009 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SPCS3P61009 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SPCS3P61009 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
SPCS3P61009 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SPCS3P61009 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SPCS3P61009 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.2■□□□□ 0.02
SPCS3P61009 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SPCS3P61009 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.2■□□□□ 0.02
SPCS3P61009 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.2■□□□□ 0.02
SPCS3P61009 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.2■□□□□ 0.02
SPCS3P61009 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.2■□□□□ 0.02
SPCS3P61009 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.2■□□□□ 0.02
SPCS3P61009 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SPCS3P61009 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.2■□□□□ 0.02
SPCS3P61009 AL160286.2-201ENST00000567150 934 ntBASIC15.2■□□□□ 0.02
SPCS3P61009 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.2■□□□□ 0.02
SPCS3P61009 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.2■□□□□ 0.02
SPCS3P61009 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.2■□□□□ 0.02
SPCS3P61009 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SPCS3P61009 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.2■□□□□ 0.02
SPCS3P61009 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS3P61009 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.2■□□□□ 0.02
SPCS3P61009 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS3P61009 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SPCS3P61009 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS3P61009 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS3P61009 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.19■□□□□ 0.02
SPCS3P61009 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS3P61009 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SPCS3P61009 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS3P61009 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS3P61009 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms