Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 MIR1238-201ENST00000408483 83 ntBASIC17.41■□□□□ 0.38
PSMD4P55036 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD4P55036 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.41■□□□□ 0.38
PSMD4P55036 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.41■□□□□ 0.38
PSMD4P55036 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD4P55036 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD4P55036 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD4P55036 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD4P55036 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.41■□□□□ 0.38
PSMD4P55036 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
PSMD4P55036 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD4P55036 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD4P55036 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD4P55036 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD4P55036 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PSMD4P55036 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD4P55036 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD4P55036 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.4■□□□□ 0.38
PSMD4P55036 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD4P55036 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.4■□□□□ 0.38
PSMD4P55036 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD4P55036 PKD1P1-201ENST00000458669 6805 ntBASIC17.4■□□□□ 0.38
PSMD4P55036 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD4P55036 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.4■□□□□ 0.38
PSMD4P55036 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PSMD4P55036 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PSMD4P55036 AC079598.2-202ENST00000546624 1451 ntBASIC17.4■□□□□ 0.38
PSMD4P55036 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD4P55036 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.4■□□□□ 0.38
PSMD4P55036 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD4P55036 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.4■□□□□ 0.38
PSMD4P55036 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD4P55036 AL596275.1-201ENST00000423464 877 ntBASIC17.4■□□□□ 0.38
PSMD4P55036 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.4■□□□□ 0.38
PSMD4P55036 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.4■□□□□ 0.38
PSMD4P55036 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD4P55036 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD4P55036 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD4P55036 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD4P55036 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
PSMD4P55036 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PSMD4P55036 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD4P55036 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PSMD4P55036 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD4P55036 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.4■□□□□ 0.38
PSMD4P55036 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD4P55036 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
PSMD4P55036 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PSMD4P55036 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.39■□□□□ 0.38
PSMD4P55036 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PSMD4P55036 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD4P55036 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.39■□□□□ 0.37
PSMD4P55036 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.39■□□□□ 0.37
PSMD4P55036 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD4P55036 AL512353.2-201ENST00000448759 1962 ntBASIC17.39■□□□□ 0.37
PSMD4P55036 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PSMD4P55036 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.39■□□□□ 0.37
PSMD4P55036 TSPY17P-201ENST00000450329 467 ntBASIC17.39■□□□□ 0.37
PSMD4P55036 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.39■□□□□ 0.37
PSMD4P55036 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.39■□□□□ 0.37
PSMD4P55036 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.39■□□□□ 0.37
PSMD4P55036 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD4P55036 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD4P55036 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD4P55036 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD4P55036 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD4P55036 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.39■□□□□ 0.37
PSMD4P55036 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD4P55036 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PSMD4P55036 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PSMD4P55036 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PSMD4P55036 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.38■□□□□ 0.37
PSMD4P55036 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 MMP23A-201ENST00000234610 1017 ntBASIC17.38■□□□□ 0.37
PSMD4P55036 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.38■□□□□ 0.37
PSMD4P55036 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 AC128688.1-201ENST00000487626 519 ntBASIC17.38■□□□□ 0.37
PSMD4P55036 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.38■□□□□ 0.37
PSMD4P55036 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 AC116562.4-202ENST00000641738 218 ntBASIC17.38■□□□□ 0.37
PSMD4P55036 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.38■□□□□ 0.37
PSMD4P55036 HEIH-201ENST00000623091 1652 ntBASIC17.38■□□□□ 0.37
PSMD4P55036 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
PSMD4P55036 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.38■□□□□ 0.37
PSMD4P55036 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD4P55036 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms