Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITGA8P53708 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITGA8P53708 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITGA8P53708 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITGA8P53708 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ITGA8P53708 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
ITGA8P53708 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITGA8P53708 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA8P53708 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA8P53708 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA8P53708 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA8P53708 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA8P53708 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA8P53708 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA8P53708 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.18■□□□□ 0.66
ITGA8P53708 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA8P53708 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.18■□□□□ 0.66
ITGA8P53708 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA8P53708 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.18■□□□□ 0.66
ITGA8P53708 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.18■□□□□ 0.66
ITGA8P53708 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA8P53708 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
ITGA8P53708 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.18■□□□□ 0.66
ITGA8P53708 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA8P53708 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.18■□□□□ 0.66
ITGA8P53708 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.18■□□□□ 0.66
ITGA8P53708 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ITGA8P53708 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA8P53708 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.18■□□□□ 0.66
ITGA8P53708 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.18■□□□□ 0.66
ITGA8P53708 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
ITGA8P53708 AL357033.4-201ENST00000617703 1807 ntBASIC19.18■□□□□ 0.66
ITGA8P53708 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA8P53708 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA8P53708 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.18■□□□□ 0.66
ITGA8P53708 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.17■□□□□ 0.66
ITGA8P53708 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA8P53708 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.17■□□□□ 0.66
ITGA8P53708 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA8P53708 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA8P53708 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA8P53708 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA8P53708 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA8P53708 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.17■□□□□ 0.66
ITGA8P53708 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.17■□□□□ 0.66
ITGA8P53708 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA8P53708 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA8P53708 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA8P53708 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA8P53708 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.17■□□□□ 0.66
ITGA8P53708 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.17■□□□□ 0.66
ITGA8P53708 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.17■□□□□ 0.66
ITGA8P53708 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA8P53708 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ITGA8P53708 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA8P53708 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.17■□□□□ 0.66
ITGA8P53708 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA8P53708 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.17■□□□□ 0.66
ITGA8P53708 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.17■□□□□ 0.66
ITGA8P53708 KRT8P3-201ENST00000519669 1449 ntBASIC19.17■□□□□ 0.66
ITGA8P53708 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA8P53708 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA8P53708 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGA8P53708 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA8P53708 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
ITGA8P53708 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA8P53708 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ITGA8P53708 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA8P53708 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ITGA8P53708 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.16■□□□□ 0.66
ITGA8P53708 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA8P53708 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA8P53708 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA8P53708 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA8P53708 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGA8P53708 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA8P53708 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ITGA8P53708 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA8P53708 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.16■□□□□ 0.66
ITGA8P53708 AC233263.1-201ENST00000578059 224 ntBASIC19.16■□□□□ 0.66
ITGA8P53708 AC069544.1-201ENST00000609399 999 ntBASIC19.16■□□□□ 0.66
ITGA8P53708 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.16■□□□□ 0.66
ITGA8P53708 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.16■□□□□ 0.66
ITGA8P53708 MYC-208ENST00000641036 567 ntBASIC19.16■□□□□ 0.66
ITGA8P53708 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ITGA8P53708 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGA8P53708 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA8P53708 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA8P53708 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ITGA8P53708 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA8P53708 AC112777.1-201ENST00000540175 1423 ntBASIC19.16■□□□□ 0.66
ITGA8P53708 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA8P53708 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
ITGA8P53708 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITGA8P53708 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ITGA8P53708 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ITGA8P53708 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
ITGA8P53708 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.15■□□□□ 0.66
ITGA8P53708 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.15■□□□□ 0.66
ITGA8P53708 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms