Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRCA2P51587 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.88■□□□□ 0.93
BRCA2P51587 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRCA2P51587 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRCA2P51587 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRCA2P51587 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.88■□□□□ 0.93
BRCA2P51587 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRCA2P51587 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.87■□□□□ 0.93
BRCA2P51587 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRCA2P51587 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.87■□□□□ 0.93
BRCA2P51587 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRCA2P51587 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.87■□□□□ 0.93
BRCA2P51587 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRCA2P51587 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRCA2P51587 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
BRCA2P51587 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
BRCA2P51587 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
BRCA2P51587 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
BRCA2P51587 AP001269.4-201ENST00000609611 512 ntBASIC20.87■□□□□ 0.93
BRCA2P51587 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRCA2P51587 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRCA2P51587 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRCA2P51587 AC112482.1-201ENST00000492080 688 ntBASIC20.87■□□□□ 0.93
BRCA2P51587 AC010240.3-201ENST00000607688 395 ntBASIC20.87■□□□□ 0.93
BRCA2P51587 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRCA2P51587 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.87■□□□□ 0.93
BRCA2P51587 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.87■□□□□ 0.93
BRCA2P51587 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRCA2P51587 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRCA2P51587 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.86■□□□□ 0.93
BRCA2P51587 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRCA2P51587 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.86■□□□□ 0.93
BRCA2P51587 FAM8A3P-201ENST00000427218 844 ntBASIC20.86■□□□□ 0.93
BRCA2P51587 SCARNA2-201ENST00000458748 420 ntBASIC20.86■□□□□ 0.93
BRCA2P51587 AL356488.2-201ENST00000602755 427 ntBASIC20.86■□□□□ 0.93
BRCA2P51587 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
BRCA2P51587 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRCA2P51587 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRCA2P51587 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.86■□□□□ 0.93
BRCA2P51587 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRCA2P51587 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.86■□□□□ 0.93
BRCA2P51587 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.86■□□□□ 0.93
BRCA2P51587 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
BRCA2P51587 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.86■□□□□ 0.93
BRCA2P51587 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRCA2P51587 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
BRCA2P51587 AL109659.2-201ENST00000606809 1674 ntBASIC20.86■□□□□ 0.93
BRCA2P51587 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
BRCA2P51587 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRCA2P51587 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRCA2P51587 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRCA2P51587 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRCA2P51587 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.85■□□□□ 0.93
BRCA2P51587 MINOS1P3-201ENST00000457048 203 ntBASIC20.85■□□□□ 0.93
BRCA2P51587 IGHV3-41-201ENST00000613121 348 ntBASIC20.85■□□□□ 0.93
BRCA2P51587 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.85■□□□□ 0.93
BRCA2P51587 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.85■□□□□ 0.93
BRCA2P51587 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRCA2P51587 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRCA2P51587 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
BRCA2P51587 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.85■□□□□ 0.93
BRCA2P51587 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.85■□□□□ 0.93
BRCA2P51587 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.85■□□□□ 0.93
BRCA2P51587 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
BRCA2P51587 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
BRCA2P51587 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.85■□□□□ 0.93
BRCA2P51587 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRCA2P51587 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
BRCA2P51587 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRCA2P51587 NUS1P2-201ENST00000417358 873 ntBASIC20.85■□□□□ 0.93
BRCA2P51587 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
BRCA2P51587 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
BRCA2P51587 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.85■□□□□ 0.93
BRCA2P51587 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.85■□□□□ 0.93
BRCA2P51587 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.85■□□□□ 0.93
BRCA2P51587 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
BRCA2P51587 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.85■□□□□ 0.93
BRCA2P51587 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
BRCA2P51587 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRCA2P51587 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
BRCA2P51587 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
BRCA2P51587 FGFR3P6-201ENST00000457012 610 ntBASIC20.84■□□□□ 0.93
BRCA2P51587 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.84■□□□□ 0.93
BRCA2P51587 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRCA2P51587 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRCA2P51587 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRCA2P51587 RPS8P6-201ENST00000426177 609 ntBASIC20.84■□□□□ 0.93
BRCA2P51587 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRCA2P51587 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.84■□□□□ 0.93
BRCA2P51587 AL355877.3-201ENST00000622820 899 ntBASIC20.84■□□□□ 0.93
BRCA2P51587 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.84■□□□□ 0.93
BRCA2P51587 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.84■□□□□ 0.93
BRCA2P51587 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.84■□□□□ 0.93
BRCA2P51587 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRCA2P51587 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.84■□□□□ 0.93
BRCA2P51587 AC132008.2-207ENST00000454517 770 ntBASIC20.84■□□□□ 0.93
BRCA2P51587 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.84■□□□□ 0.93
BRCA2P51587 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BRCA2P51587 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRCA2P51587 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms