Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.89□□□□□ -0.35
PCP4P48539 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.89□□□□□ -0.35
PCP4P48539 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.89□□□□□ -0.35
PCP4P48539 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
PCP4P48539 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC12.89□□□□□ -0.35
PCP4P48539 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC12.89□□□□□ -0.35
PCP4P48539 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
PCP4P48539 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
PCP4P48539 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
PCP4P48539 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
PCP4P48539 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.89□□□□□ -0.35
PCP4P48539 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC12.89□□□□□ -0.35
PCP4P48539 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.89□□□□□ -0.35
PCP4P48539 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCP4P48539 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC12.89□□□□□ -0.35
PCP4P48539 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.89□□□□□ -0.35
PCP4P48539 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
PCP4P48539 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
PCP4P48539 AL121761.2-201ENST00000598007 1648 ntBASIC12.88□□□□□ -0.35
PCP4P48539 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
PCP4P48539 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
PCP4P48539 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
PCP4P48539 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 AC026691.1-201ENST00000602502 2017 ntBASIC12.88□□□□□ -0.35
PCP4P48539 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 AC106886.4-201ENST00000623557 2502 ntBASIC12.88□□□□□ -0.35
PCP4P48539 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PCP4P48539 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PCP4P48539 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PCP4P48539 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.88□□□□□ -0.35
PCP4P48539 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.88□□□□□ -0.35
PCP4P48539 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
PCP4P48539 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.88□□□□□ -0.35
PCP4P48539 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.88□□□□□ -0.35
PCP4P48539 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
PCP4P48539 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
PCP4P48539 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 AC127502.1-201ENST00000399971 1502 ntBASIC12.88□□□□□ -0.35
PCP4P48539 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PCP4P48539 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
PCP4P48539 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.87□□□□□ -0.35
PCP4P48539 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
PCP4P48539 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
PCP4P48539 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
PCP4P48539 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
PCP4P48539 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCP4P48539 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PCP4P48539 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCP4P48539 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.87□□□□□ -0.35
PCP4P48539 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.87□□□□□ -0.35
PCP4P48539 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PCP4P48539 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC12.87□□□□□ -0.35
PCP4P48539 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
PCP4P48539 H19-201ENST00000411754 1788 ntTSL 5 BASIC12.87□□□□□ -0.35
PCP4P48539 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.87□□□□□ -0.35
PCP4P48539 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCP4P48539 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC12.87□□□□□ -0.35
PCP4P48539 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
PCP4P48539 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PCP4P48539 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.87□□□□□ -0.35
PCP4P48539 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCP4P48539 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
PCP4P48539 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PCP4P48539 AC026471.6-201ENST00000622954 1905 ntBASIC12.87□□□□□ -0.35
PCP4P48539 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms