Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.87■□□□□ 0.77
SSR1P43307 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSR1P43307 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SSR1P43307 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.87■□□□□ 0.77
SSR1P43307 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
SSR1P43307 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SSR1P43307 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.86■□□□□ 0.77
SSR1P43307 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SSR1P43307 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.86■□□□□ 0.77
SSR1P43307 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SSR1P43307 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
SSR1P43307 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.86■□□□□ 0.77
SSR1P43307 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.86■□□□□ 0.77
SSR1P43307 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.86■□□□□ 0.77
SSR1P43307 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.86■□□□□ 0.77
SSR1P43307 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.86■□□□□ 0.77
SSR1P43307 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.86■□□□□ 0.77
SSR1P43307 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSR1P43307 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.85■□□□□ 0.77
SSR1P43307 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SSR1P43307 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.85■□□□□ 0.77
SSR1P43307 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.85■□□□□ 0.77
SSR1P43307 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.85■□□□□ 0.77
SSR1P43307 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 AC004980.1-204ENST00000429707 299 ntBASIC19.85■□□□□ 0.77
SSR1P43307 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.85■□□□□ 0.77
SSR1P43307 KSR1P1-201ENST00000446298 240 ntBASIC19.85■□□□□ 0.77
SSR1P43307 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.85■□□□□ 0.77
SSR1P43307 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.85■□□□□ 0.77
SSR1P43307 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.85■□□□□ 0.77
SSR1P43307 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.85■□□□□ 0.77
SSR1P43307 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.85■□□□□ 0.77
SSR1P43307 NOC2LP1-202ENST00000452600 2235 ntBASIC19.85■□□□□ 0.77
SSR1P43307 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.85■□□□□ 0.77
SSR1P43307 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
SSR1P43307 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SSR1P43307 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.85■□□□□ 0.77
SSR1P43307 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.85■□□□□ 0.77
SSR1P43307 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSR1P43307 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSR1P43307 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSR1P43307 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SSR1P43307 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSR1P43307 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSR1P43307 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSR1P43307 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSR1P43307 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSR1P43307 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.84■□□□□ 0.77
SSR1P43307 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.84■□□□□ 0.77
SSR1P43307 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSR1P43307 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSR1P43307 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSR1P43307 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.84■□□□□ 0.77
SSR1P43307 AL353807.1-201ENST00000427475 662 ntBASIC19.84■□□□□ 0.77
SSR1P43307 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.84■□□□□ 0.77
SSR1P43307 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.84■□□□□ 0.77
SSR1P43307 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SSR1P43307 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.84■□□□□ 0.77
SSR1P43307 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.84■□□□□ 0.77
SSR1P43307 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.84■□□□□ 0.77
SSR1P43307 AC083906.6-201ENST00000641366 219 ntBASIC19.84■□□□□ 0.77
SSR1P43307 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.84■□□□□ 0.77
SSR1P43307 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSR1P43307 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSR1P43307 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.84■□□□□ 0.77
SSR1P43307 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSR1P43307 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SSR1P43307 KRT16P1-201ENST00000399124 1418 ntBASIC19.84■□□□□ 0.77
SSR1P43307 KRT8P11-201ENST00000409686 1436 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms