Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.92■□□□□ 0.62
HADHAP40939 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.92■□□□□ 0.62
HADHAP40939 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HADHAP40939 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HADHAP40939 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HADHAP40939 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
HADHAP40939 MFAP1P1-201ENST00000442257 1255 ntBASIC18.92■□□□□ 0.62
HADHAP40939 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HADHAP40939 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HADHAP40939 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HADHAP40939 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.92■□□□□ 0.62
HADHAP40939 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HADHAP40939 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HADHAP40939 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HADHAP40939 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HADHAP40939 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
HADHAP40939 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HADHAP40939 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HADHAP40939 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HADHAP40939 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
HADHAP40939 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.92■□□□□ 0.62
HADHAP40939 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HADHAP40939 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HADHAP40939 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HADHAP40939 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HADHAP40939 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HADHAP40939 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
HADHAP40939 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HADHAP40939 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.91■□□□□ 0.62
HADHAP40939 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HADHAP40939 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HADHAP40939 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HADHAP40939 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HADHAP40939 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.91■□□□□ 0.62
HADHAP40939 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HADHAP40939 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.91■□□□□ 0.62
HADHAP40939 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.91■□□□□ 0.62
HADHAP40939 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
HADHAP40939 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
HADHAP40939 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.91■□□□□ 0.62
HADHAP40939 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HADHAP40939 AC005082.1-201ENST00000413042 2259 ntBASIC18.91■□□□□ 0.62
HADHAP40939 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HADHAP40939 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.91■□□□□ 0.62
HADHAP40939 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HADHAP40939 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HADHAP40939 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.91■□□□□ 0.62
HADHAP40939 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HADHAP40939 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.91■□□□□ 0.62
HADHAP40939 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.91■□□□□ 0.62
HADHAP40939 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HADHAP40939 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.9■□□□□ 0.62
HADHAP40939 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.9■□□□□ 0.62
HADHAP40939 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.9■□□□□ 0.62
HADHAP40939 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.9■□□□□ 0.62
HADHAP40939 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.9■□□□□ 0.62
HADHAP40939 AP005242.2-201ENST00000580065 1175 ntBASIC18.9■□□□□ 0.62
HADHAP40939 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 AC104581.1-202ENST00000635932 2618 ntBASIC18.9■□□□□ 0.62
HADHAP40939 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.9■□□□□ 0.62
HADHAP40939 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.9■□□□□ 0.62
HADHAP40939 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.9■□□□□ 0.62
HADHAP40939 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.9■□□□□ 0.62
HADHAP40939 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HADHAP40939 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HADHAP40939 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.9■□□□□ 0.62
HADHAP40939 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
HADHAP40939 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.89■□□□□ 0.62
HADHAP40939 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HADHAP40939 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HADHAP40939 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.89■□□□□ 0.61
HADHAP40939 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.89■□□□□ 0.61
HADHAP40939 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HADHAP40939 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HADHAP40939 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HADHAP40939 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HADHAP40939 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HADHAP40939 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.89■□□□□ 0.61
HADHAP40939 CRYGFP-201ENST00000418459 633 ntBASIC18.89■□□□□ 0.61
HADHAP40939 RBM17P1-201ENST00000453646 1190 ntBASIC18.89■□□□□ 0.61
HADHAP40939 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.89■□□□□ 0.61
HADHAP40939 CA15P1-201ENST00000481698 905 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms