Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PTPN6P29350 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN6P29350 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN6P29350 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
PTPN6P29350 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
PTPN6P29350 FAM197Y1-201ENST00000421178 764 ntBASIC17.75■□□□□ 0.43
PTPN6P29350 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN6P29350 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN6P29350 KSR1P1-201ENST00000446298 240 ntBASIC17.75■□□□□ 0.43
PTPN6P29350 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN6P29350 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.75■□□□□ 0.43
PTPN6P29350 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PTPN6P29350 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN6P29350 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN6P29350 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.75■□□□□ 0.43
PTPN6P29350 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN6P29350 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN6P29350 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN6P29350 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PTPN6P29350 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.75■□□□□ 0.43
PTPN6P29350 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
PTPN6P29350 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPN6P29350 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PTPN6P29350 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPN6P29350 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPN6P29350 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
PTPN6P29350 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
PTPN6P29350 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PTPN6P29350 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPN6P29350 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPN6P29350 MIR4785-201ENST00000585005 73 ntBASIC17.74■□□□□ 0.43
PTPN6P29350 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPN6P29350 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPN6P29350 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PTPN6P29350 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
PTPN6P29350 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN6P29350 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN6P29350 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN6P29350 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN6P29350 KRT8P3-201ENST00000519669 1449 ntBASIC17.73■□□□□ 0.43
PTPN6P29350 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN6P29350 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN6P29350 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN6P29350 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN6P29350 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN6P29350 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PTPN6P29350 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN6P29350 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN6P29350 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPN6P29350 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.73■□□□□ 0.43
PTPN6P29350 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PTPN6P29350 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PTPN6P29350 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.73■□□□□ 0.43
PTPN6P29350 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPN6P29350 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN6P29350 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN6P29350 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PTPN6P29350 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN6P29350 KRT17P2-201ENST00000300992 1314 ntBASIC17.72■□□□□ 0.43
PTPN6P29350 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN6P29350 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN6P29350 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN6P29350 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN6P29350 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
PTPN6P29350 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN6P29350 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN6P29350 PCDHB18P-201ENST00000524813 2368 ntBASIC17.72■□□□□ 0.43
PTPN6P29350 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN6P29350 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN6P29350 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN6P29350 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN6P29350 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN6P29350 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PTPN6P29350 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.72■□□□□ 0.43
PTPN6P29350 AC004980.1-204ENST00000429707 299 ntBASIC17.72■□□□□ 0.43
PTPN6P29350 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.72■□□□□ 0.43
PTPN6P29350 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.72■□□□□ 0.43
PTPN6P29350 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms