Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
BCKDHBP21953 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BCKDHBP21953 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BCKDHBP21953 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
BCKDHBP21953 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
BCKDHBP21953 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
BCKDHBP21953 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
BCKDHBP21953 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.44■□□□□ 0.54
BCKDHBP21953 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
BCKDHBP21953 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
BCKDHBP21953 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BCKDHBP21953 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.44■□□□□ 0.54
BCKDHBP21953 AF228730.7-201ENST00000641842 219 ntBASIC18.44■□□□□ 0.54
BCKDHBP21953 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
BCKDHBP21953 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.44■□□□□ 0.54
BCKDHBP21953 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BCKDHBP21953 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
BCKDHBP21953 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BCKDHBP21953 AL157384.1-201ENST00000445995 2473 ntBASIC18.44■□□□□ 0.54
BCKDHBP21953 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BCKDHBP21953 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.44■□□□□ 0.54
BCKDHBP21953 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.43■□□□□ 0.54
BCKDHBP21953 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
BCKDHBP21953 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
BCKDHBP21953 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.43■□□□□ 0.54
BCKDHBP21953 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.43■□□□□ 0.54
BCKDHBP21953 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.43■□□□□ 0.54
BCKDHBP21953 RNA5SP419-201ENST00000515908 135 ntBASIC18.43■□□□□ 0.54
BCKDHBP21953 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.43■□□□□ 0.54
BCKDHBP21953 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.43■□□□□ 0.54
BCKDHBP21953 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.43■□□□□ 0.54
BCKDHBP21953 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
BCKDHBP21953 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.43■□□□□ 0.54
BCKDHBP21953 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.43■□□□□ 0.54
BCKDHBP21953 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.43■□□□□ 0.54
BCKDHBP21953 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.43■□□□□ 0.54
BCKDHBP21953 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BCKDHBP21953 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.42■□□□□ 0.54
BCKDHBP21953 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.42■□□□□ 0.54
BCKDHBP21953 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
BCKDHBP21953 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 VENTXP7-201ENST00000475503 772 ntBASIC18.42■□□□□ 0.54
BCKDHBP21953 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.42■□□□□ 0.54
BCKDHBP21953 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.42■□□□□ 0.54
BCKDHBP21953 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.42■□□□□ 0.54
BCKDHBP21953 MIR3180-4-201ENST00000582223 153 ntBASIC18.42■□□□□ 0.54
BCKDHBP21953 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.42■□□□□ 0.54
BCKDHBP21953 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.42■□□□□ 0.54
BCKDHBP21953 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
BCKDHBP21953 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.42■□□□□ 0.54
BCKDHBP21953 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
BCKDHBP21953 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.42■□□□□ 0.54
BCKDHBP21953 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 AL353692.3-201ENST00000407031 1396 ntBASIC18.42■□□□□ 0.54
BCKDHBP21953 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BCKDHBP21953 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BCKDHBP21953 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
BCKDHBP21953 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.41■□□□□ 0.54
BCKDHBP21953 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BCKDHBP21953 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BCKDHBP21953 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.54
BCKDHBP21953 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
BCKDHBP21953 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.41■□□□□ 0.54
BCKDHBP21953 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BCKDHBP21953 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
BCKDHBP21953 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BCKDHBP21953 TREX1-205ENST00000625293 1783 ntBASIC18.41■□□□□ 0.54
BCKDHBP21953 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
BCKDHBP21953 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
BCKDHBP21953 SLC25A1P1-201ENST00000528351 927 ntBASIC18.41■□□□□ 0.54
BCKDHBP21953 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms